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A Novel And Improved Method For Initial Focus Point Selection In Whole Slide Imaging Using Spiral Equidistant Sampling

Abstract: This invention presents a novel method for enhancing autofocus accuracy in Whole Slide Imaging systems through a spiral based equidistant sampling strategy for initial focus point selection. Traditional autofocus methods employ a regular grid of focus points, which can introduce aliasing artifacts, poorly adapt to non rectangular scan geometries, and fail to account for surface irregularities in glass slides. To overcome these limitations, the proposed approach utilizes Archimedean or Fermat spiral geometries to distribute focus points equidistantly across the scanning region. This spiral sampling pattern improves spatial uniformity, reduces interpolation distortion in the generated 3D depth map, and offers greater adaptability to the topological variations commonly encountered in biological specimens. The method is computationally efficient and especially advantageous for low-cost and GPU accelerated whole slide imaging systems, providing a robust initialization for adaptive autofocus algorithms without increasing system complexity

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Notices, Deadlines & Correspondence

Patent Information

Application #
Filing Date
26 May 2025
Publication Number
24/2025
Publication Type
INA
Invention Field
BIO-MEDICAL ENGINEERING
Status
Email
Parent Application

Applicants

Vyuhaa Med Data Private Limited
4/608 G1 VOC Street Perungudi OMR Chennai Neelankarai Chennai City

Inventors

1. Krishna Mohan Reddy
101 Venkataramana Residency Naveen Nagar Banjara hills Hyderabad
2. Dhritiman Mallick
Purva Skywood Silver County Road G1402

Specification

Description:DETAILED DESCRIPTION OF THE INVENTION:

In conventional Whole Slide Imaging (WSI) systems, the initial generation of a 3D depth map for autofocusing is critical for ensuring sharp and accurate digital slide images. A common method involves selecting a set of 9 or more initial focus points arranged in a regular rectangular grid pattern across the scanning area. While simple, this method can lead to aliasing artifacts in the interpolated depth surface due to the symmetric and repetitive structure of the sampling grid, particularly when the slide contains non-planar regions or subtle topological undulations.

Spiral-Based Sampling Innovation
We propose an enhanced sampling scheme based on a spiral pattern with equidistant spacing along the spiral path rather than fixed Cartesian grid points. This non-linear, quasi-random sampling technique offers superior spatial distribution and reduces interpolation bias and aliasing effects when generating the initial 3D surface model.

Technical Description of Spiral-Based Sampling
1. Spiral Geometry
The proposed sampling follows an Archimedean spiral or a Fermat spiral layout, defined by the polar equation:
r(θ) = a + bθ (Archimedean) or rₙ = c√n, θₙ = n·φ (Fermat)
where φ is the golden angle (~137.5°), ensuring even angular separation.
2. Equidistant Point Placement

Spiral placement distributes points more uniformly across the slide area, especially in circular or elliptical regions common in WSI scan windows. This ensures better topological coverage and reduces interpolation distortion.
3. Algorithmic Advantage

The spiral placement algorithm is efficient and allows dynamic adjustment of point numbers based on scan area. It complements adaptive sampling phases and minimizes the need for post-correction.

Benefits over Grid Sampling

Feature
Rectangular Grid
Spiral Equidistant
Aliasing Resistance Low High
Surface Fit Accuracy Moderate High
Topological Adaptability Poor Good
Visual Uniformity Rigid Natural
Application in Autofocusing

In our proposed WSI system, the initial spiral-based samples are used to create a first-pass 3D depth map. During scanning, focus inference is run at each spiral point. If the focus score is acceptable, it is accepted; otherwise, a precise focus step is triggered. The depth map is refined but initialized robustly using spiral-sampled data.
, Claims:1. A method for initial focus point selection in WSI systems using spiral-based equidistant sampling rather than a conventional grid.
2. The use of Archimedean or Fermat spiral geometries to place focus points with uniform angular separation and equidistant radial spacing.
3. An autofocusing mechanism that utilizes spiral distributed points for first pass depth map generation, followed by conditional refinement.
4. A sampling algorithm that dynamically adjusts the number of spiral points based on the scanning area.
5. An imaging system incorporating the above method to enhance auto focusing accuracy, minimize aliasing, and improve interpolation in 3D depth modeling.

Documents

Application Documents

# Name Date
1 202541050547-STATEMENT OF UNDERTAKING (FORM 3) [26-05-2025(online)].pdf 2025-05-26
2 202541050547-REQUEST FOR EARLY PUBLICATION(FORM-9) [26-05-2025(online)].pdf 2025-05-26
3 202541050547-FORM-9 [26-05-2025(online)].pdf 2025-05-26
4 202541050547-FORM FOR STARTUP [26-05-2025(online)].pdf 2025-05-26
5 202541050547-FORM FOR SMALL ENTITY(FORM-28) [26-05-2025(online)].pdf 2025-05-26
6 202541050547-FORM 1 [26-05-2025(online)].pdf 2025-05-26
7 202541050547-EVIDENCE FOR REGISTRATION UNDER SSI(FORM-28) [26-05-2025(online)].pdf 2025-05-26
8 202541050547-EVIDENCE FOR REGISTRATION UNDER SSI [26-05-2025(online)].pdf 2025-05-26
9 202541050547-DRAWINGS [26-05-2025(online)].pdf 2025-05-26
10 202541050547-DECLARATION OF INVENTORSHIP (FORM 5) [26-05-2025(online)].pdf 2025-05-26
11 202541050547-COMPLETE SPECIFICATION [26-05-2025(online)].pdf 2025-05-26
12 202541050547-STARTUP [24-06-2025(online)].pdf 2025-06-24
13 202541050547-FORM28 [24-06-2025(online)].pdf 2025-06-24
14 202541050547-FORM 18A [24-06-2025(online)].pdf 2025-06-24