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Adamts 8 Proteins And Uses Thereof

Abstract: The present invention features methods of using ADAMTS-8 proteins or their functional derivatives to cleave aggrecan or other proteoglycan molecules. The present invention also features methods for identifying ADAMTS-8 modulators that are capable of inhibiting or enhancing ADAMTS-8 proteolytic activities. In addition, the present invention features pharmaceutical compositions comprising ADAMTS-8 proteins or their derivatives or modulators. These pharmaceutical compositions can be used to treat diseases that are characterized by deficiencies or abnormalities in proteoglycan cleavage or metabolism.

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Patent Information

Application #
Filing Date
07 November 2006
Publication Number
23/2007
Publication Type
INA
Invention Field
BIOTECHNOLOGY
Status
Email
Parent Application

Applicants

WYETH
FIVE GIRALDA FARMS, MADISON, NJ 07940,

Inventors

1. LAVALLIE, EDWARD,R.
113, ANN LEE ROAD, HARVARD, MA 01451,
2. COLLINS-RACIE, LISA, A.
124, SCHOOL STREET, ACTON, MA 01720,
3. CORCORAN, CHRISTOPHER, JOHN
170, BROADWAY, APT 3, ARLINGTON, MA 02474,
4. AGOSTINO, MICHAEL, J.
26 WOLCOTT AVENUE, ANDOVER, MA 01810,
5. FREEMAN, BETHANY, A.
54 HULL STREET, BELMONT, MA 02478,
6. ARAI, MAYA
1070, BEACON STREET, 3B, BROOKLINE, MA 02446,
7. FLANNERY, CARL, R.
13 BRUCEWOOD ROAD, ACTON, MA 01720,
8. JIN, MACY, X.
15 LAKEVIEW AVENUE, UNIT 7, READING, MA 01867,

Specification

WO 2005/116197 PCT/US2005/012539 1 PROTEASES AND USES THEREOF [0001] This application claims the benefit and incorporates by reference the entire disclosure of U.S. Provisional Application Serial No. 60/562,687, filed April 16,2004. TECHNICAL FIELD [0002] The present invention relates to ADAMTS-8 proteins and their derivatives and modulators, and methods of using the same to treat diseases that are characterized by deficiencies or abnonnalitics in proteoglycan cleavage or metabolism. BACKGROUND [0003] The ADAMTS (A Disintegrin And Metalloprotease with ThromboSpondin motifs) family includes at least 19 members that are related to one another on the basis of their common domain structure. In contrast to members of the ADAM family, ADAMTS proteins lack a transmembrane domain and contain at least one thrombospondin 1-like motif. A typicaJ ADAMTS protein contains, from N- to C-tcrminus, a signal sequence, a prodomain, a metalloprotease catalytic domain, a disintegrin-like domain, a central thrombospondin type I repeat, a cysteine-ricb. domain, and a spacer domain. Sec Cat, et a I., GENE, 283:49-62 (2002). Many ADAMTS proteins also include one or more thrombospondin 1 -like repeats following the spacer domain. ADAMTS proteins are capable of associating with components of the extracellular matrix through interactions within the spacer domain and the thrombospondin 1-Iike repeat(s). See Kuno and Matsushima, J. BiOL. CHEM., 273:13912-13917(1998). [0004] The physiological roles of a small subset of ADAMTS family members have been elucidated, and in some cases aberrant expression has been implicated in human disease. ADAMTS-2, ADAMTS-3, and ADAMTS-14 reportedly function as procollagenases. ADAMTS-2 has been identified as a procollagen I N-proteinase (pNPI) responsible for processing of type I and type IT procollagens. The absence of type I procollagen processing results in the accumulation of collagen fibrils that retain the amino-terminarpropeptide (pN-collagen I). Fibrils constructed from pN-collagen I do not provide normal levels of tensile strength, thereby causing disease-associated connective tissue defects. Ehlers-Danlos syndrome type VlIC is a human recessive genetic disorder caused by the inability to process type 1 procollagen to collagen, resulting in loss of joint integrity and fragility of the skin. A related disease seen in cattle, sheep, and some breeds of cat is called dermatosparaxis WO2005/116197 PCT/US2005/012539 2 ("tearing of skin"). Both of these diseases have been linked to loss of ADAMTS-2 activity. Residual atnino-propeptide cleavage of type 1 collagen in the absence of ADAMTS-2 activity led to the discovery that ADAMTS-14 is also capable of cleaving type I collagen in vitro. ADAMTS-3 has been proposed to be the major procollagen II N-propeptidase. ADAMTS-13 has been identified as a plasma protease that cleaves von Willebrand factor (vWF) at a specific Tyr-Mct bond within the A2 domain. Thrombotic thrombocytopenic purpura (TTP) is a syndrome characterized by microvascular thrombosis, low platelet count, and anemia. It is postulated that lack of appropriate (Cleavage of large vWF (UL-vWF) multimers released from endothelial cells may result in TTP. Genetic analysis of 4 familial TTP pedigrees demonstrated that mutations in the ADAMTS-13 gene were largely responsible for this disorder. [0005] ADAMTS-1, ADAMTS-4, ADAMTS-5,4nd ADAMTS-9 have been shown to be capable of cleaving the extracellular matrix pfoteoglycans with varying degrees of efficiency. For instance, ADAMTS-1; ADAMTS-4, and ADAMTS-5 can cleave the Glii373-Ala374 bond in the interglobular domain (IGD) of aggrecan. See Caterson, et aL, MATRIX BIOLOGY, 19:333-344 (2000). This proteolytic activity is referred to as aggrecanase activity, and the Glu373-Ala374 bond is known as the aggrecanase cleavage site. A protein possessing the aggrecanase activity is called an aggrecanase. The GIu373-Ala374 bond is hydrolyzed in •vivo during degenerative joint diseases such as osteoarthritis. Evidence suggests that aggrecanases are responsible for primary cleavage of the IGD during cartilage degradation. See Caterson, et aL, supra. ADAMTS4 was also found to play a role in the cleavage of brevican, a proteoglycan abundant in adult brain, and, together with ADAMTS1, has been shown to cleave versican. [0006] ADAMTS-8, also known as Meth2, has been implicated in angiogenesis. Studies have shown that recombinant ADAMTS-8 can inhibit endothelial cell proliferation in vitro, and vascularization in in vivo assays. See, for example, Vazquez, et at., 3. BIOL. CHEM., 274:23349-23357 (1999). ADAMTS-8 appears to disrupt angiogenesis in vitro and in vivo more efficiently than thrombospondin-1 or endostain, but less efficiently than ADAMTS-1. No proteolytic activity has been identified for ADAMTS-8. SUMMARY OF THE INVENTION [0007] The present invention features the use of isolated ADAMTS-8 proteins to cleave proteoglycans. Methods suitable.for this purpose comprise contacting a proteoglycan molecule with an isolated ADAMTS-8 protein which cleaves the proteoglycan molecule. In WO 2005/116197 PCT/US2005/012539 3 many embodiments, the proteoglycan molecule being cleaved is' an aggrecan molecule, and the isolated ADAMTS-8 protein cleaves.the aggrecan molecule at the Glu373-Ala374 bond. The ADAMTS-8 proteins employed in the present invention can be full-length, mature ADAMTS-8 proteins. In one example, the ADAMTS-8 protein employed comprises or consists of amino acids 214-890 of SEQ ID NO:28. In another example, the ADAMTS-8 protein employed is encoded by GenBank Accession No. AF060153 but lacks signal peptide and prodomain. [0008] The present invention also features the use of isolated ADAMTS-8 derivatives to cleave proteoglycans. These ADAMTS-8 derivatives comprise an ADAMTS-8 metalloprotease catalytic domain and possess the proteoglycan cleavage activities (e.g., aggrecanase activity) of the full-length, mature ADAMTS-8 proteins. Contacting such an ADAMTS-8 derivative with a proteoglycan molecule (e.g., an aggrecan molecule) cleaves the proteoglycan molecule. In one example, the ADAMTS-8 metalloprotease catalytic domain employed in the present invention comprises or consists of amino acids 214-439 of SEQ ID NO:28. An ADAMTS-8 derivative can further include an ADAMTS-8 disintegrin- like domain and/or an ADAMTS-8 central thrombospondin type I repeat. (0009] ADAMTS-8 derivatives suitable for the present invention can be prepared by any conventional means. In many cases, the ADAMTS-8 derivatives do not include signal peptide or prodomain. The ADAMTS-8 derivatives can be prepared from full-length ADAMTS-8 proteins through deletion, insertion or substitution of selected amino acid residues. In one embodiment, an ADAMTS-8 derivative employed in the present invention comprises or consists of amino acids 214-588 of SEQ ID NO:28. ADAMTS-7 or ADAMTS-9 derivatives consisting of the corresponding amino acid sequences have been shown to retain the aggrecanase activity of the original full-length proteins. [0010] In another aspect, the present invention features the use of recombinantly- produced ADAMTS-8 proteins or their derivatives to cleave proteoglycans. Methods suitable for this purpose comprise expressing an ADAMTS-8 protein or a derivative thereof from a recombinant expression vector. The expressed ADAMTS-8 protein or derivative cleaves a proteoglycan molecule (e.g., an aggrecan molecule) upon contact Any ADAMTS-8 protein or derivative described herein can- be recombinantly produced. In many embodiments, recombinant vectors encoding ADAMTS-8 proteins or derivatives are expressed in mammalian cells which secrete the expressed proteins or derivatives into culture media or extracellular matrix regions. In one example, a recombinant expression vector employed in the present invention comprises a sequence encoding amino acids 214-890 of SEQ ID NO:28. WO 2005/116197 PCT/US2005/0I2539 4 In another example, a recombinant expression vector employed in the present invention comprises a sequence.encoding amino acids 214-588 of SEQ ID NO.28. In still another example, a recombinant expression vector employed in the present invention comprises the protein coding sequence of GenBank Accession No. AF060153. [0011] The proteoglycans being cleaved according to the present invention can be located in a tissue, a tissue culture, or a .cell culture. An isolated or recombinantly-produced ADAMTS-8 protein or derivative can be delivered to a tissue site by any conventional means, such as by parenteral, intravenous, topical, intradermal, transdennal or subcutaneous administration, or by introducing an expression vectors encoding an ADAMTS-8 protein or derivative into selected cells at the tissue site. [0012] The present, invention further features methods for the identification of ADAMTS-8 modulators. These methods comprise: contacting an ADAMTS-8 protein or derivative with a proteoglycan molecule (e.g., an aggrecan molecule) in the presence or absence of an agent of interest; and measuring the proteoglycan cleavage activity (e.g., aggrecanase activity) of the ADAMTS-8 protein or derivative in the presence or absence of the agent A change in the proteoglycan cleavage activity (e.g., aggrecanase activity) in the presence of the agent, as compared to in the absence of said agent, indicates that the agent is capable of modulating the proteoglycan cleavage activity of the ADAMTS-8 protein or derivative. Any ADAMTS-8 protein or derivative described herein can be used for screening for ADAMTS-8 modulators. The modulators identified according to the present invention can inhibit (e.g., reduce or eliminate) or enhance the proteoglycan cleavage activity (e.g., aggrecanase activity) of an ADAMTS-8 protein. [0013] The present invention also features the use of ADAMTS-8 modulators to treat diseases that are characterized by deficiencies or abnormalities in.proteoglycan cleavage (e.g., aggrecan cleavage). Methods suitable for this purpose comprise administering a therapeutically effective amount of an ADAMTS-8 modulator to a mammal in need thereof. Any route of administration can be used, provided that the ADAMTS-8 modulator can reach the desired tissue site(s) and is effective in altering proteoglycan cleavage activities at the site(s). Any ADAMTS-8 modulator identified by the present invention can be used for treating proteoglycan deficiencies or abnormalities. [0014] The proteoglycan cleavage activities at a tissue site can also be modulated by introducing an isolated ADAMTS-8 protein or derivative, or by expressing a recombinant ADAMTS-8 protein or derivative at the site. Moreover, proteoglycan cleavage activities in WO2005/116197 PCT/US2005/012539 5 an extracellular matrix region can be modulated by inhibiting the expression of ADAMTS-8 in selected cells in the region. Methods suitable for this purpose include, but are not limited to, introducing or expressing an ADAMTS-8 RNAi or antisense sequence in the selected cells. In many cases, the RNAi or antisense sequence employed is specific for the ADAiMTS-8 gene and incapable of inhibiting the expression of other protease genes. [0015] The present invention also features pharmaceutical compositions comprising ADAMTS-8 proteins or their derivatives or modulators. [0016] Other features, objects, and advantages of the present invention arc apparent in the detailed description that follows. It should be understood, however, that the detailed description, while indicating preferred embodiments of the present invention, is given by way of illustration only, not limitation. Various changes and modifications within the scope of the invention will become apparent to those skilled in the art from the detailed description. BRIEF DESCRIPTION OF THE DRAWINGS [0017] The drawings are provided forilrustxation, not limitation. [0018] Figure 1 illustrates a phylogerietic tree of ADAMTS family members. Amino acid sequences of multiple ADAMTS proteins werei compared using CLUSTALW, and displayed using Tree View. The phylogram groups the proteins together based upon sequence relatedness. [0019] Figure 2A shows a 10% SDS-PAGE of protein fractions from Strep-tag® purification (IBA, Germany) of ADAMTS-8 proteins isolated from CHO conditioned media. The SDS-PAGE was stained with Coomassie Brilliant Blue. Lanes: 1, CHO cell conditioned medium; lane 2, flow-through fraction (filtrate) from ultrafiltration; lane 3, concentrated ultrafiltrarjon retentate fraction; lane 4, Streptactin column flow-through fraction; lanes 5-9, Streptactin column wash fractions; lanes 10-15, Streptactin column elution fractions. [0020] Figure 12B is a Western blot of the SDS-PAGE of Figure 2A using an anti Strep^Tag II polyclonal antiserum (IBA). [0021] Figure 3A 'depicts a multiple tissue expression array of mRNA from 76 different human tissues, probed with a cDNA fragment probe from human ADAMTS-8 gene. [0022] Figure 3B indicates the sources of mRNA. used by the multiple tissue expression array of Figure 3A. Blank boxes indicate that no mRNA was spotted at those coordinates. Tissues with high relative abundance of ADAMTS-8 mRNA are lung (A8), aorta (B4), and fetal heart (B11), with lower levels of ADAMTS-8 mRNA detectable in appendix (G5) and various regions of the brain (Al-Gl, C3-H3, and B3). WO 2005/116197 PCT/US 20 05/012539 !, [0023] Figure 4 demonstrates a histogram of ADAMTS-8 mRNA expression levels in human clinical samples of disease-free and osteoarthritic (OA) cartilage determined by real time PCR. Samples W-04 through W-13 represent non-0 A affected ("Disease-Free") knee articular cartilage. Samples 77M - 96M represent visually unaffected;regions of late-stage OA articular cartilage (','Mild OA"). Samples 88S - 98S represent severely affected regions of late-stage OA articular cartilage ("Severe OA")- ADAMTS-8 mRNA abundance in each sample was reported as a normalized value, by dividing the averaged data determined for ADAMTS-8 by the averaged data determined for GAPDH in the same sample. [0024] Figure 5 shows the results of competitive inhibition ELISAs using monoclonal antibody AGG-C1. Streptavadin-coated microtiter plates were coated with biotinylated aggcl peptide. Inhibition analyses were performed using the following competitors: synthetic peptide GGLPLPRNITEGE (SEQ ID NO:22, closed squares), GGLPLPRNITEGEARGSVILTVK-CONH2 (SEQ ID NO:23, open squares), ADAMTS-4 digested aggrecan (closed circles), and undigested aggrecan (open circles). [0025] Figure 6A is a Western blot of ADAMTS-4 and ADAMTS-8 digested bovine aggrecan using monoclonal antibody BC-3. Bovine aggrecan was incubated without or with ADAMTS-4 or ADAMTS-8 for 16 h at 37°C. Digestion products were separated by SDS-PAGE and visualized by Western immunoblotting using monoclonal antibody BC-3. Lane 1, no enzyme added; lane 2, ADAMTS-4 digested aggrecan (1:20 molar ratio enzymersubstrate); lanes 3-7, ADAMTS-8 digested aggrecan at molar ratio enzyme:substrate shown above each lane. Trie migration positions of globular protein standards arc shown to the left of the blot. [0026] Figure 6B is a Western,blot of ADAMTS-8 digested bovine aggrecan using monoclonal antibody AGG-C1. Bovine aggrecan was incubated with either no enzyme, or with increasing molar ratios of ADAMTS-8 for 16 h at 37°C Digestion products were separated SDS-PAGE and visualized by Western immunoblotting using monoclonal antibody AGG-C1. The relative molar ratio of enzvme:substrate in each digest is indicated. [0027] Figure 6C depicts a Western blot of ADAMTS-4 digested bovine aggrecan using monoclonal antibody AGG-C1. Bovine aggrecan (12.5 pmol) was incubated with either no enzyme, or with 0.05 ng, 0.1 ng, 0.25 ng, 0.5 ng, or 1 ng of ADAMTS^, respectively, for 16 h at 37°C. Digestion products were separated in SDS-PAGE and visualized by Western immunoblotting using AGG-C1. The relative molar ratio of enzymersubstrate in each digest is indicated. WO200S/116197 PCT/US2005/012539 7 [0028] Figure 7 shows the result of competitive inhibition ELISA for aggrecanase activity. The standard curve was generated by incubating bovine aggrecan with increasing amounts of recombinant ADAMTS-4 for 16 h at 37°C followed by addition of monoclonal antibody AGG-C1 to each digest. It requires approximately 1 ng of ADAMTS-4 to generate an amount of aggrecan cleavage product that results in 45% inhibition in the competitive inhibition ELISA. DETAILED DESCRIPTION [0029] The present invention features the use of ADAMTS-8 proteins or their derivatives to cleave proteoglycan molecules. The present invention also features methods for identifying ADAMTS-8 modulators that are capable of inhibiting or enhancing ADAMTS-8 proteolytic activities. In addition, the present invention provides pharmaceutical compositions comprising ADAMTS-8 proteins or their derivatives or modulators. These pharmaceutical compositions can be used to treat conditions that are characterized by deficiencies or abnormalities in proteoglycan cleavage or metabolism. 10030J Various aspects of the invention are described in detail in the following sections. The use of sections is not meant to limit the invention. Each section can apply to any aspect of the invention. In this application, the use1 of "or" means "and/or" unless stated otherwise. I. ADAMTS-8 PROTEINS AND THEIR FUNCTIONAL DERIVATIVES [0031] The present invention features the use of mature ADAMTS-8 proteins for the cleavage of aggrecan or other proteoglycan molecules. Mature ADAMTS-8 proteins lack signal peptide and prodomain. Examples of suitable mature ADAMTS-8 proteins include , but are not limited to, full-length mature ADAMTS-8 proteins (e.g., the furin-processed ADAMTS-8 protein encoded by GenBank Accession No. AFO6O153), and mature ADAMTS-8 isoforms produced by alternative RNA splicing or proteolytic processing of the ancillary domains. Alternative RNA splicing, which results in deletion of one or more C- terminal thrombospondin 1-like repeats, has been observed for certain members of the ADAMTS family. Proteolytic removal of C-terminal ancillary domains during the maturation process has also been reported for certain ADAMTS family members. [0032] The present invention also contemplates the use of unprocessed ADAMTS protein1 for the cleavage of aggrecan or other proteoglycan molecules. These unprocessed WO 2005/116197 FCT/US2005/012539 8 proteins include signal peptidc or prodomain. In many cases, the unprocessed ADAMTS-8 proteins are recombinantly expressed in suitable host cells and secreted into culture media or extracellular matrix regions. These secreted proteins typically lack the signal sequence. These proteins can be further proteolytically processed to remove the prodomain. [0033] The ADAMTS-8 proteins employed in the present invention can be naturally- occurring proteins, such as that encoded by GenBank Accession No. AF060153 or its naturally-occurring proteolytic products. In one example, the ADAMTS-8 protein employed in the present invention comprises amino acids 214-890 of SEQ ID NO:28. [0034] The present invention also features the use of variants of naturally-occurring ADAMTS-8 proteins for the cleavageiof aggrecan or other proteoglycan molecules. These variants retain the proteoglycan cleavage activities (e.g., aggrecanase activity) of the original proteins. The amino acid sequence of a variant is substantially identical to that of the original protein. In one example, the amino acid sequence of a variant has at least 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 99%, or more global sequence identity or similarity to the original protein. Sequence identity or similarity can be determined using various methods known in the art For instance, sequence identity or similarity can be determined using standard alignment algorithms, such as Basic Local Alignment Tool (BLAST) described in Altschul, et al, J. MOL. BlOL., 215:403-410 (1990), the algorithm of Needleman, et al., J. MOL. BlOL., 48:444-453 (1970), the algorithm of Meyers, et al, COMPUT. APPL. BIOSCL, 4:11-17(1988), and dot matrix analysis; Softwares suitable for this purpose include, but are not limited to, BLAST programs provided by the National Center for Biotechnology Information (Bethesda, MD) and MegAlign provided by DNASTAR, Inc. (Madison, WI). In one instance, the sequence identity or similarity is determined using the Genetics Computer Group (GCG) programs GAP (NeedJeman-Wunsch algorithm). Default values assigned by the programs can be employed (e.g., the penalty for opening a gap in one of the sequences is 11 and for extending the gap is 8). Similar amino acids can be defined using the BLOSUM62 substitution matrix. 10035] ADAMTS-8 protein variants can be naturally-occurring, such as by allelic variations or polymorphisms, or deliberately engineered. In many examples, conservative amino acid substitutions can be introduced into a protein sequence without significantly changing the structure or biological activity of the protein. Conservative amino acid substitutions can be made on the -basis of similarity in polarity, charge, solubility, hydrophobicity, hydrophilicity, or the amphipathic nature of the residues. For instance, conservative amino acid substitutions can be made among amino acids with basic side chains, WO 2005/116197 PCT/US2005/012539 such as lysine (Lys or K), arginine (Am or R) and histidine (His or H); amino acids with acidic side chains, such as aspartic acid (Asp or D) and glutamic acid (Glu or E); amino acids with uncharged polar side chains, such as asparagine (Asn or N), glutamine (Gin or Q), serine (Senor S), threonine (Thr or T), and tyrosine (Tyr or Y); and amino acids with nonpolar side chains, such as alanine (AJa or A), glycine (Gly or G), valine (Val or V), leucine (Leu or L), isoleucine (De or I), proline (Pro or P), phenylalanine (Phe or F), methionine (Met or M), tryptophan (Tip or W) and cysteine (Cys or C). Other suitable amino acid substitutions are illustrated in Table 1. Table 1, Exemplary Amino Acid Substitutions Original Residues Exemplary Substitutions More Conservative Substitutions Ala (A) Val, Leu, IIe Val Arg(R) Lys, Gln, Asn Lys Asn(N) , Gln Gin Asp.(D) Glu Glu Cys (C) Ser, Ala Ser Gln(Q) Asn Asn Gly (G) Pro, Ala Ala His (H) Asn, Gln, Lys, Arg Arg He (I) Leu, Val, Met, Ala, Phe, Norleucine Leu Leu(L) Norleucine, IIe, Val, Met, Ala, Phe He Lys(K) Arg, 1,4 Diamino-buryric Acid, Gln, Asn Arg Met(M) Leu, Phe, IIe Leu Phe(F) Leu, Val, IIe, Ala, Tyr Leu Pro(P) Ala r Gly Ser(S) Thr, Ala, Cys Thr Thr(T) Ser Ser Trp(W) Tyr, Phe Tyr Tyr(Y) Trp, Phe, Thr, Ser Phe Val(V) IIe, Met, Leu, Phe, Ala, Norleucine Leu [0036], Non-narurally-occurring amino acid residues can also be used for substitutions. These amino acid residues are typically incorporated by chemical peptide synthesis rather than by synthesis in biological systems. WO 2005/116197 PCT/US2005/012539 10 [0037] In addition, ADAMTS-8 variants can include amino acid substitutions to increase the stability of the molecules. Other desirable amino acid substitutions (whether conservative or non-conservative) can also be introduced into ADAMTS-8 proteins. For instance, amino acid residues important to a proteolytic activity of an ADAMTS-8 protein can be identified. Substitutions capable of increasing or decreasing that proteolytic activity can be selected. {0038] Moreover, ADAMTS-8 variants can include modifications of glycosylation sites. These modifications can involve O-linked or N-linked glycosylation sites. For instance, the amino acid residues at asparagine-linked glycosylation recognition sites can be substituted or deleted, resulting in partial glycosylation or complete abolishment! of glycosylation. The asparagine-1 inked glycosylation recognition sites typically comprise tripeptide sequences that are recognized by appropriate cellular glycosylation enzymes. These tripeptide sequences can be, for example, asparagine-X-threonine or asparagine-X- serine, where X is usually any amino acid. A variety of amino add substitutions or deletions. at one or both of the first or third amino acid positions of a glycosylation recognition site (or amino acid deletion at the second position) can result in non-glycosylation at the modified tripeptide sequence. Additionally, bacteria] expression also results in production of non- glycosylated proteins, even if the glycosylation sites are left unmodified. [0039] Other types of modifications can also be introduced into an ADAMTS-8 variant. These modifications can be .introduced by naturally-occurring processes, such as posttranslational modifications, or by artificial or synthetic processes. Modifications may occur anywhere in the polypeptide, including the backbone, the amino acid side chains, and the amino or carboxyl termini. The same type of modification can be present in the same or varying degrees at several sites in a variant. A variant can also include many different types of modifications. Modifications suitable for this invention include, but are not limited to, acetylation, acylation, ADP-ribosylation, amidation, covalent attachment of flavin, covalent attachment of a heme moiety, covalent attachment of a nucleotide or nucleotide derivative, covalent attachment of a lipid or lipid derivative, covalent attachment of phosphatidylinositol, cross-linking, cyclization, disulfide bond formation, demethylation,. formation of covalent cross-links, formation of cysteihe, formation of pyroglutamate, fonnylation, gamma- carboxylation, glycosylation, GPI anchor formationt hydroxylation, iodination, methylation, myristoylation, oxidation, pegylation, proteolytic processing, phosphorylation, prenylarion, racemization, selenoylation, sulfation, transfer-RNA mediated addition of amino acids to proteins such as arginylation, ubiquitination, or any combination thereof. A polypeptide WO 2005/116197 PCT/US2005/012539 11 variant can be branched (e.g., as a result' of ubiquitination), or cyclic, with or without branching. [0040] An ADAMTS-8 variant employed in the present invention can be substantially identical to the original ADAMTS-8 protein in one or more regions, but divergent in other regions. An ADAMTS-8 variant can retain the overall domain structure of the original ADAMTS-8 protein. In one embodiment, a variant is prepared by modifying at least 1, 2, 3, 4, 5, 10, 15, 20, 25, 30, 35, 40, 45, 50, or more amino acid residues ;of a naturally-occurring ADAMTS-8 sequence. Exemplary modifications include, but are not limited to, substitutes, deletions, and insertions. The substitutions can be conservative, non-conservative, or both. These modifications do not significantly affect the proteolytic activities (e.g., aggrecanase activity) of the original protein; For instance, a variant can retain at least 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or more of a proteolytic activity (e.g., aggrecanase activity) of the original ADAMTS-8 protein. A variant can also have an improved proteolytic activity (e.g., improved aggrecanase activity) as compared to the original ADAMTS-8 protein. [0041] The present invention further features the use of ADAMTS-8 derivatives for the cleavage of aggrecan or proteoglycan molecules. These ADAMTS-8 derivatives are modified ADAMTS-8 proteins with deletions or modification of one or more amino acid residues. In one example, an ADAMTS-8 derivative includes deletion of a substantial portion of an ancillary domain of a full-length ADAMTS-8 protein. In another example, an ADAMTS-8 derivative includes deletion of the spacer domain and the C-termina] thrombospondin 1-like repeat from a full-length ADAMTS-8 protein. Any region after the spacer domain and the C-terminal thrombospondin 1-like repeat can also be deleted. [0042]: In one embodiment, an ADAMTS-8 derivative employed in the present invention includes deletion of a substantial portion of the amino acid residues located after Phe588 of SEQ ID NO:28. ADAMTS-7 or ADAMTS-9 truncations with deletion of the corresponding sequences have been shown to retain the aggrecanase activity of the original proteins. The amino acid residues deleted from a full-length ADAMTS-8 protein can include, without limitation, at least 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 96%, 97%, 98%, 9.9%, or 100% of the amino acid residues that are located C-terminal to Phe588. The deleted1 amino acid residues can be selected from the cysteine-rich domain, the spacer domain, the C-terminal;thrombospondin 1-like repeat, or any region located therebetween or thereafter. The deleted residues can be contiguous or noncontiguous. In one example, an ADAMTS-8 derivative comprises or consists of amino acids 214-588 of SEQ ID NO:28. WO 2005/116197 PCT/US 2005/012539 12 [0043] Amino acid residues in the N-terminal region of an ADAMTS-8 protein can also be modified. For instance, certain selected residues in the signal sequence, the prodomain, the metalloprotease catalytic domain, the disintegrin-like domain, or the central thrombospondin type I repeat can be deleted or otherwise modified without significantly reducing the proteolytic activities (e.g., aggrecanase activity) of the ADAMTS-8 protein.! [0044] Additional poiypeptides can be fused to the N- or C- terminus of an ADAMTS-8 protein or its functional derivatives. Non-limiting examples of these poiypeptides include peptide lags, enzymes, antibodies, receptors, ligand/receptor binding proteins, or combinations thereof. Antibodies suitable for this purpose include, but are not limited to, polyclonal, monoclonal, mono-specific, poly-specific, non-specific, humanized; human, single-chain, chinjeric, synthetic, recombinant, hybrid, mutated, grafted, or in vitro generated antibodies. Antibody fragments can also be used. Examples of these antibody fragments include, but are not limited to, Fab, F(ab')2, Fv, Fd, or dAb. [0045J Peptide tags can also be added to an ADAMTS-8 protein or its derivatives. Suitable peptide tags include, but are not limited to, the Strep-tag® (IBA), the poly-histidine or poly-histidine-glycine tag, the FLAG epitope tag, the KT3 epitope peptide, the flu HA tag polypeptide, the c-myc tag, the Herpes simplex glycoprotein D, beta-galactosidase, maltose binding protein, streptavidin tag, tubulin epitope peptide, the T7 gene 10 protein peptide tag, and glutathione S-transferase. Antibodies against these peptide tags can be readily obtained from a variety of commercial sources. Representative antibodies include antibody 12GA5 against the flu HA tag polypeptide, and the 8F9, 3C7, 6E10, G4, B7 and 9E10 antibodies against the c-myc tag. Peptide linkers can be added between a peptide tag and the original protein to enhance the accessibility of the peptide tag. [0046] Proteolytically cleavable site(s) can be introduced between an added polypeptide and the original protein. These cleavable sites allow separation of the original protein from the added polypeptide. Enzymes suitable for this puipose include, but are not limited to, Factor Xa, thrombin, and enteroldnase. . [0047J The added poiypeptides can be used to facilitate protein purification, detection, immobilization, folding or targeting, or serve other desired purposes. These poiypeptides can also be used to increase the expression, solubility, or stability of the fusion proteins. In many embodiments, the added poiypeptides do not significantly affect the proteolytic activities (e.g., aggrecanase activity) of the fusion proteins. WO 2005/116197 PCT/US2005/012539 13 II. POLYNUCLEOTIDES ENCODING ADAMTS-8 PROTEINS OR THEIR FUNCTIONAL DERIVATIVES [0048] Polynucleotides encoding ADAMTS-8 proteins or their derivatives can be prepared using a variety of methods. These polynucleotides can be DNA, RNA, or other expressible nucleic acid molecules. They can be single-stranded or double-stranded. [0049] In one embodiment, GenBank Accession No. AF060153 is used for the preparation of coding sequences of ADAMTS-8 proteins or their derivatives. Deletions or other modifications can be introduced into the protein coding sequence of GenBank Accession No. AF060153 using standard recombinant DNA techniques. Exemplary DNA deletion/modification techniques include, but are not limited to, PCR-mediated mutagenesis, oligonucleotide-directed "loop-out" mutagenesis, PCR overlap extension, time-controlled digestion with exonuclease III, the megaprimer procedure, inverse PCR, and automated DNA synthesis. [0050] Deletion libraries can also be used. These deletion libraries include coding sequences for N-terminal, C-terminal, or internal deleted ADAMTS-8 proteins. Exemplary methods for the construction of deletion libraries include, but are not limited to, that described in Pues, et al., NUCLEIC ACIDS RES., 25:1303-1305 (1997). Commercial deletion kits, such as the E2::TN Plasmid-Based Deletion Machine and the pWEB::TNC™ Deletion Cosmid Transposition Kit (Epicentre, Madison, WI), can also be used to generate ADAMTS-8 deletion libraries. Deletions that retain the proteolyric activity of the original ADAMTS-8 protein can be selected. [0051] The polynucleotides employed in the present invention can be modified to increase their stabilities in vivo. Possible modifications include, but are not limited to, the addition of flanking sequences at the 5' or 3' end; the use of phosphorothuoate or 2-o-methyl instead of phosphodiesterase linkages in the backbone; and the inclusion of nontraditional bases such as inosine, queosine and wybutosine, as well as acetyl-, methyl-, thio-, or other modified forms of adenine, cytidine, guanine, thymine and uridine. [0052J The present invention also features expression vectors that encode ADAMTS- 8 proteins or their functional derivatives. These expression vectors comprise 5' or 3' untranslated regulatory sequences operably linked to a protein coding sequence that encodes an ADAMTS-8 protein or a functional derivative thereof. The design of expression vectors depends on such factors as the choice of the host cells and the desired expression levels. Non-limiting examples of suitable expression vectors include bacterial expression vectors, WO 2005/11 ADAMTS-8 coding sequences. The 5' end of each target sequence includes dinucleotide *^NA," where "N" can be any base and "A" represents adenine. The remaining 19-mer sequence has a GC content of between 35% and 55%. In addition, the remaining 19-mer sequence does not include any four consecutive A or T (i.e., AAAA or TTTT), three consecutive G or C (i.e., GGG or CCC), or seven "GC" in a row. Wb 2005/116197 PCT7US200S/012539 23 [0089J Additional criteria can also be included for RNAi target sequence design. For instance, the GC content of the remaining 19-mer sequence can be limited to between 45% and 55%. Moreover, any 19-mer sequence having three consecutive identical bases (i.e., GGG, CCC, TTT, or AAA) or a palindrome sequence with 5 or more bases can be excluded. Furthermore, the remaining 19-mer sequence can be selected to haveilow sequence hofhology to other genes. In one example, potential target sequences are searched by BLASTN against NCBI's human UniGene cluster sequence database. The human UniGene database contains non-redundant sets of gene-oriented clusters. Each UniGene cluster includes sequences that represent a unique gene. 19-mer sequences that produce no hit to other human genes under the BLASTN search can be selected. During the search, the e-value may be set at a stringent value (such as at "1"). [0090] The effectiveness of the siRNA sequences of the present invention can be evaluated using numerous methods. For instance, an siRNA sequence of the present invention can be introduced into a cell which expresses ADAMTS^. The polypeptide or mJRNA level of ADAMTS-8 in the cell can ;be detected. A decrease in the ADAMTS-8 expression level after the introduction of the siRNA sequence indicates that the siRNA sequence introduced is effective for inducing RNA interference. [0091] The expression levels of other genes can also be monitored before and after the introduction of siRNA sequences. siRNA sequences that have inhibitory effect on the expression of the ADAMTS-gene 8 but not other genes can be selected. In addition, different siRNA sequences can be introduced into the same cell for the suppression of the ADAMTS-8 gene. VI. DISEASE TREATMENT [0092] The present invention features the use of ADAMTS-8 modulators to treat protease-related diseases. ADAMTS-8 modulators include, but are not limited to, ADAMTS-8 antibodies, ADAMTS-8 inhibitors, ADAMTS-8 antisense or RNAi sequences, and vectors encoding or comprising ADAMTS-8 antisense or RNAi sequences. Protease-related diseases that are amenable to the present invention include, without limitation, cancer, inflammatory joint disease, osteoarthritis, rheumatoid arthritis, septic arthritis, periodontal diseases, corneal ulceration, proteinuria, coronary thrombosis from atherosclerotic plaque rupture, aneurysmal aortic idisease, inflammatory bowel disease, Crohn's disease, emphysema, acute respiratory distress syndrome, asthma, chronic obstructive pulmonary disease, Alzheimer's disease, brain WO 2005/116197 PCT/US200S/012539 24 and hematopoietic malignancies, osteoporosis, Parkinson's disease, migraine, depression, peripheral neuropathy, Huntington's disease, multiple sclerosis, ocular angiogenesis, macular degeneration, aortic aneurysm myocardial infarction, autoimmune disorders, degenerative cartilage loss following traumatic joint injury, head trauma, dystrophobic epidermolysis bullosa, spinal cord injury, acute and chronic neurodegenerative diseases, osteoperiias, tempero mandibular joint disease, demyelating diseases of the nervous system, organ transplant toxicity and rejection, cachexia, allergy, tissue ulcerations, restenosis, and other diseases characterized by abnormal- degradation of extracellular matrix proteins^ or proteoglycan molecules. [0093] Treatment can include both therapeutic treatments and prophylactic or preventative measures. Those in need of treatment include individuals already having a particular medical disorder, as well as those who may ultimately acquire the disorder. In many examples, a desired treatment regulates the proteolytic activity or gene expression of ADAMTS-8 so as to prevent or ameliorate clinical symptoms of the disease. ADAMTS-8 modulators can function, for example; by preventing the interaction between ADAMTS-8 and its proteoglycan substrate, reducing or eliminating the catalytic activity of ADAMTS-8, or reducing or eliminating the transcription or translation of the ADAMTS-8 gene. [0094] In one embodiment, ADAMTS-8 modulators (e.g., antibodies or inhibitors) are administered to humans or animals in pharmaceutical compositions. A pharmaceutical composition typically includes a pharmaceutically acceptable carrier and a therapeutically effective amount of an ADAMTS-8 modulator. Examples of pharmaceutically acceptable carriers include solvents, solubili2ers, fillers, stabilizers, binders, absorbents, bases, buffering agents, lubricants, controlled release vehicles, diluents, emulsifying agents, humectants, lubricants, dispersion media, coatings, antibacterial or antifungal agents, isotonic and absorption delaying agents, and the like, that are compatible with pharmaceutical administration. The use of carrier media and agents for pharmaceutically active substances is well-known in the art. Supplementary agents can also be incorporated into the compositions. [0095] The pharmaceutical compositions of the present invention can be formulated to be compatible, with its intended route of administration. Examples of routes of administration include parenteral, intravenous, intradermal, subcutaneous, oral, inhalation, transdermal, rectal, transmucosal, topical, and systemic administration. In one example, the administration is carried out by using an implant [0096] In one embodiment, solutions or suspensions used for parenteral, intradermal, or subcutaneous applications include the following components: a sterile diluent such as WO 2005/116197 PCT/US20 05/012539 25 water, saline solution, fixed oils, polyethylene glycols,; glycerine, propylene glycol, or other synthetic solvents; antibacterial agents such as benzyl alcohol or methyl parabens; antioxidants such as ascorbic acid or sodium bisulfate; chelating agents such as ethylenediaminetetraacetic acid; buffers such as acetates, citrates, or phosphates; and agents for the adjustment of tonicity such as sodium chloride or dextrose. The pH of a pharmaceutical composition can be adjusted with acids or bases, such as hydrochloric acid or sodium hydroxide. In one example, pareriteral preparations are enclosed in ampoules, disposable syringes, or multiple dose vials made of glass or plastic. [0097] A pharmaceutical composition of the present invention can be administered to a patient or animal such that the ADAMTS-8 modulator comprised therein is in a sufficient amount to reduce or abolish the targeted ADAMTS-8 activity or expression. Suitable therapeutic dosages for an ADAMTS-8 antibody or inhibitor can range, without limitation, from 5 nig to 100 mg, from 15 mg to 85 mg, from 30 mg to 70 mg, or from 40 mg to 60 mg. Dosages below 5 mg or above 100 mg can also be used. ADAMTS-8 antibodies or inhibitors can be administered in one dose or multiple doses. The doses can be administered at intervals such as, without limitation, once daily, once weekly, or once monthly. Dosage schedules for administration of an ADAMTS-8 antibody or inhibitor can be adjusted based on, for example, the affinity of the antibody/inhibitor for its target, the half-life of the antibody/inhibitor, and the severity of the patient's condition. In one embodiment, antibodies or inhibitors are administered as a bolus dose, to maximize their circulating levels. In another embodiment, continuous infusions are used after the bolus dose. (0098] Toxicity and therapeutic efficacy of ADAMTS-8 modulators can be determined by standard pharmaceutical procedures in cell culture or experimental animal models. For instance,; the LD50 (the dose lethal to 50% of the population) and the ED50 (the dose therapeutically effective in 50% of the population) can be determined. The dose ratio between toxic and therapeutic effects is the therapeutic index, and can be expressed as the ratio LD50/ED50. In one example, modulators which exhibit large therapeutic indices are selected. [0099] The data obtained from cell culture assays or animal studies can be used in formulating a range of dosages for use in humans. In many cases, the dosage of such compounds or modulators may lie within a range of circulating concentrations that exhibit an ED50 with little or no toxicity. The dosage may vary within this range depending upon the dosage form employed and the route of administration utilized. For any modulator.used according to the present invention, a therapeutically effective dose can be estimated initially WO2005/I16I97 PCT/US2005/012539 26 from cell culture assays or animal models. In one embodiment, a dose may be formulated in animal models to achieve a circulating plasma concentration range that exhibits an IC$o(i.e., the concentration of the test inhibitor which achieves a half-maximal inhibition of symptoms) as determined by cell culture assays. Levels in plasma may be measured, for example, by high performance liquid chromatography. The effects of any particular dosage can! be monitored by suitable bioassays. Examples of bioassays include DNA replication assays, transcription-based assays, GDF protein/receptor binding assays, creatine kinase assays, assays based on the differentiation of pre-adipocytes, assays based on glucose uptake in adipocytes, and immunological assays. [0100] The dosage regimen for administration of a pharmaceutical composition ofithe present invention can be determined by the attending physician based on various factors such as the site of pathology, the severity of disease, the patent's age, sex, and diet, the severity of any inflammation, time of administration, and other clinical factors. -In certain embodiments, systemic or injectable administration is initiated at a dose which is minimally effective, and the dose will be increased over a preselected time course until a positive effect is observed. Subsequently, incremental increases in dosage will be made limiting to levels that produce a corresponding increase in effect while taking ;into account any adverse affects that may appear. The addition of other known factors to a final composition may also affect the dosage. [0101] The present invention also contemplates treatment of diseases that are caused by or associated with abnormal accumulation of aggrecan or other proteoglycans. In one embodiment, the treatment includes administering a pharmaceutical composition comprising an ADAMTS-8 protein or a functional |derivative thereof to a human or animal affected by such a disease. In another, embodiment, vector-based therapies are used to correct the abnormal accumulation of proteoglycans. These therapies typically comprise introducing an expression vector or a gene-delivery ;vector that encodes an ADAMTS-8 protein or a functional derivative thereof into a human or animal in need thereof. [0102] It should be understood that the above-described embodiments and the following examples are given by way of illustration, not limitation. Various changes and modifications within the scope of the present invention will become apparent to those skilled in the art from the present description. WO 2005/116197 PCT/US2005/012539 27 EXAMPLES Example 1, Generation of the Phvloeram [D103] The following human ADAMTS family member proteins were collected for the generation of a phylogram: ADAMTS-1/AB037767, ADAMTS-2/AJ003125 (with the following changes in the published sequence compared to the sequence used in the phylogram: W643C, P1001L, and S1089C), ADAMTS-3/AF247668, ADAMTS-4/AFI48213, ADAMTS-5/AF142099, ADAMTS-6/"SEQ ID NO:2" in US patent application publication 20020120113, ADAMTS-7/AF140675, ADAMTS-8/AF060153 (with the following changes in the published sequence compared to the sequence used in the phylogram: LI IP, F13L, L21P, P23A, L24A, and: LI29Q, where 1A refers to deletion), ADAMTS-9/AF261918 (with the following changes in the published; sequence compared to the sequence used in the phylogram: G46S, and S96T), ADAMTS- 10/"SEQ ED NO:9" in PCT publication number WO 02/60942 (with the following change in the published sequence compared to the sequence used in the phylogram: V267I), ADAMTS-12/AJ250725, ADAMTS-13/AJ305314, ADAMTS-14/AF358666 (with the following change in the published sequence compared to the sequence used in the phylogram: L937M), ADAMTS-15/AJ315733, ADAMTS-16/"SEQ ID NO:4" in PCT .publication number WO 02/31163, ADAMTS-17/AJ315735 (with the following changes in ithe published sequence compared to the sequence used in the phylogram: replacement of amino acid sequence 713ALKD716 with ammo acid sequence 713GYIEAAVIPAGARRJRWEDKPAHSFLIALKD743 (SEQ ID NO:1)), ADAMTS-18/AJ311903, ADAMTS-19/AJ311904, and ADAMTS-20/"SEQ ID NO:57" in PCT publication number WO 01/83782. ¦ The 19 protein sequence files were concatenated into a single multi-FASTA file and used as input into CLUSTALW 1.81 (see, e.g., the website at www.ebi.ac.uk) and run on IRJX64. CLUSTAL'W was run under the default settings. The resulting .dnd treefile'was used as input for TREEVIEW 1.6.6 (Page, COMPUT. APPL. BIOSCL, 12:357-358 (1996); and the website at taxonomy.zoology.gla.ac.uk/ rod/treeview.html) to generate the phylogram. [0104] The phylogenetic tree of ADAMTS family members are shown in Figure 1. The phylogram groups the proteins together based upon sequence relatedness. ADAMTS family members that were grouped together by the program were compared to the known fractional information for ADAMTS family members that have been characterized. For instance, ADAMTS-2, 3 and 14 are predicted to be pro-collagen processing enzymes. These WO 2005/116197 PCT/US2005/012539. 28. family members are most similar to each other by sequence homology and form a unique cluster on the phylogenetic tree. For another instance, mutations in ADAMTS-13 have been shown to cause defects in vWF processing resulting in thrombotic thrombocytopenic purpura. This family member forms its own node on the phylogenetic tree. In addition, ADAMTS-1, 4, 5, and 9 have been shown to cleave aggrecan with varying efficiency. Analysis of sequence homology demonstrated a cluster that contained all of these aggrecan-degrading ADAMTSs plus ADAMTS-8, 15, and 20, suggesting that ADAMTS-8 may also possess aggrecan-cleavage activities. ADAMTS-8 was subsequently cloned, expressed, and purified to determine its ability to cleave aggrecan. [0105] To date, at least 19 members of the ADAMTS family have been identified. Less than half of the ADAMTS proteins have had functions ascribed to them, leaving at least 10 members that have no known function. Construction of a phylogenetic tree (Figure 1) based upon sequence similarities between family members led to the observation that those ADAMTS family members with similar functions (e.g. demonstrated aggrecan-degrading activity or procollagen processing activity) were grouped together. This suggested that other members of the putative, "aggrecan-degrading" node of the phylogenetic tree may possess significant aggrecanase .activity, and perhaps may show greater disease-association to osteoarthritis than ADAMTS-4 or ADAMTS-5. As demonstrated in the following examples, ADAMTS-8, another member of the "aggrecan-degrading" node, is capable of cleaving aggrecan at the osteoarthritis-relevant Glu373-Ala374 bond and therefore the structure/function association predicted by sequence homologies holds true for this protein. Example 2. Construction of an ADAMTS-8 Expression Vector [0106] The DNA sequence for ADAMTS-8 was deposited in GenBank by Vazquez et aL, supra (accession number AF060153). For gene isolation, 4 sets of oligonucleotide primer pairs that span the ADAMTS-8 open reading frame were designed: [0107] The first primer pair includes ATGTTCCCCGCCCCCGCCGCC CCCCGGTG (SEQ ID NO:2) and GGATCCCCCGAGGCGCTCGATCTTGAACT (SEQ ID NO:3). The second primer pair includes GGATCCGGCCGGGCGACCGGGGGC (SEQ ID NO:4) and CTCTAGAAGCTCTGTGAGATACATGGCGCT (SEQ ID NO:5). The third primer pair includes CTCTAGACGGCGGGCACGGAGACTGTCTCCTG GATGCCCCTGGTGCGGCCCTGCCCCTCCCCACA (SEQ ID NO:6) and ACGTGT ATTTGACTTTTGGGGGGAAGACCTCGCCAGGGACTGTCAGGAGCTGCACTGTCAG WO 2005/116197 PCI7US2005/012S39 29 AGGCTC (SEQ ID NO:7). The fourth primer pair includes CACACGTTCTTTGTTC CTAATGACGTGGACTTTAG (SEQ ID NO:8) and GCGGCCGCTCACAGGGG GCACAGCTGGCTTTC (SEQ ID NO:9). [0108] PCR amplification was performed on an adult lung cDNA library using the GC kit from Clontcch following the manufacturer's recommendations. Amplification of the PCRiproducts was performed in a Perkin Elmer 9600. Fifty microliter PCR reactions were heated to 95°C for a 1 minute pre-incubation step immediately followed by 25 cycles consisting of incubation at 95°C for 15 seconds followed by incubation at 68°C for 2 minutes. The resulting PCR products were purified, digested with appropriate restriction enzymes (EcoR I/BamH I, BamH 1/Xba I, Xba I/All in, Afl m/Not I respectively), and ligated together into the CHO expression vector pHTop (a derivative of pED). The PCR insert was verified by DNA sequencing. [0109] The ADAMTS-8 expression construct was modified by addition of a Strep- tag® sequence (IBA). The tag was added using PCR primers with a 3* extension encoding a five amino acid linker (GSGSA (SEQ ID NO: 10)) followed by additional sequence encoding an 8 amino acid Strep-tag (WSHPQFEK (SEQ ID NO:I1)). These 13 amino acids were added as a C-terminal translations] fusion to the final amino acid of the ADAMTS-8 open reading frame. The PCR primer pair consisted of a forward primer CTTCTAGACGGCGGGCACGGAGAC (SEQ ID NO: 12) and a reverse primer TTCTAGAGCGGCCGCCTTATTTTTCGAACTGCGGGTGGCTCCAAGCAGATCCGGA TCCCACK3GGGCATAGCTGGCTTTCGCA (SEQ ED NO: 13). Amplification of the PCR product was performed in a Perkin Elmer 9600. Pfu Turbo Hotstart (Stratagene) was used as the DNA polymerase and the reaction conditions followed those recommended by the manufacturer. PCR reactions were initially heated to 94CC for 2 minutes, followed by 25 cycles of 94°C for 15 seconds/70°C for 2 minutes. After the final cycle, the PCR reactions were held for 5 minutes at 72°C. The PCR product was purified, digested with the appropriate restriction enzymes (Bgl II/Not I)i and then ligated together with the appropriate ADAMTS-8 fragments into thepHTop expression vector. [0110] Several amino acid variations were identified when comparing AF060153 to the cloned sequence. The observed changes were restricted to the signal peptide and the prodomain. Two of the variations in the signal sequence of the ADAMTS-8 isolate were also found in a GenBank database sequence submission, accession number AAB74946. The observed changes in the ADAMTS-8 isolate that could not be ascribed to alleiic variations (e.g., FI3 and F14 deleted and U29Q) resulted in a 25 amino acid signal peptide and a single amino acid change in the prodomain. These changes did not affect expression or activity of the mature protein by virtue of their locations and were left unchanged in the expression construct. The predicted protein sequence for the mature portion of the protein was identical to AF060153. Example 3. Establishment of alCHO Cell'Line for Expression of ADAMTS-8 [0111J CHO/A2 cells were used to establish the ADAMTS-8 expressing stable cell line. The CHO/A2 cell line was derived from CHO DUKX Bl I1 by stable integration of the transcriptional activator tTA, a fusion protein comprised of the Tet repressor and the herpes virus VP16 transcriptional domain. The ADAMTS-8/pHTop expression vector contains six repeats of the tet operator upstream of the ADAMTS-8 sequence. Binding of tTA to the Tet operator in pHTop activates transcription of the downstream gene. The gene encoding dihydrofolate reductasc is also contained on the pHTop expression vector, allowing for selection of stable transfectants by virtue of metbotrexate resistance. A CHO cell line expressing extracellular ADAMTS-8 was established by transfecting pHTop/ADAMTS-8 DNA into CHO/A2 'cells using the manufacturer's recommended protocol for Hpofection (Lipofectin from InVitrogen). Clones were selected in 0.02 ^^M roethotrcxate. Cell lines expressing the highest level of ADAMTS-8 protein were selected by monitoring ADAMTS-8 antigen in the CHO conditioned media by Western blotting using an anti-Strep-tag antibody conjugated to horseradish peroxidase (HRP) (Southern Biotech) followed by ECL chemilurainesccnce (Amersham Biosciences) and autoradiography. Example 4. Purification of ADAMTS-8 [0112] Conditioned medium (300 ml) from a stable CHO cell line expressing ADAMTS-8 was collected and concentrated 3-fold (10 ml) by ultrafiltration using a stir cell (Amicon) fitted with a 10 kDa MAVCO (molecular weight cut-off) filter. Avidin immobilized on cross-linked 6% beaded agarose (lml) from Sigma was mixed with the concentrated conditioned medium for I hour at 4°C to remove any contaminating biotin. The supernatant was recovered following centrifugation, and loaded onto a 1 ml Strep-Tactin column (IBA). The column was washed with five 1 ml aliquots of Buffer W (lOOmM Tris, pH 8.0, 150 mM NaCl), and the bound protein was eluted from the column with Buffer W containing 2.5 mM WO 2005/116197 PCT/US2005/012539 31 desthiobiotin (Sigma). AJiquots of concentrated conditioned medium, column flow through, wash and elution fractions were analyzed!by 10% SDS-PAGE gel analysis (Figure 2A) followed by Western analysis using the anti Strep-Tag II polyclonal antiserum (IBA) and ECL detection by autoradiography (Figure 2B). 10113] Figure 2 A illustrates the 10% SDS-PAGE of protein fractions from Strep-tag purification of ADAMTS-8 from CHO conditioned media. The SDS-PAGE was stained with Coomassie Brilliant Blue. Lane 1 indicates the CHO cell conditioned medium. Lane 2 shows the flow-through fraction (filtrate) from ultrafiltration. Lane 3 is the concentrated ultrafiltration retentate fraction. Lane 4 represents Strep-Tactin column flow-through fraction. Lanes 5-9 are Strep-Tactin columnwash fractions. Lanes 10-15 depict Strep-Tactin column elution fractions. [0114] Figure 2B shows a corresponding Western blot of the SDS-PAGE of Figure 2A. The Western analysis employed the anti Strep-Tag U polyclonal, antiserum (IBA). [0115] The expected molecular weights of unprocessed and furin-processed ADAMTS-8 containing the Strep-tag, not accounting for altered mobility due to glycosylation, are 95 kDa and 75 kDa, respectively. The major products of the purification were 2 bands that migrated on SDS-PAGE at apparent'molecular, weights of 110 kDa and 95 kDa (Figure 2A, lane 12) and bound the Strep-tag antibody on Western blots (Figure 2B, lane 12). Co-expression of soluble PACE (Furin or paired basic amino acid cleaving enzyme) with the ADAMTS-8 expression construct in CHO/A2 cells resulted in the elimination of the 110 kDa pro-ADAMTS-8 band with a concomitant increase in the amount of the 95 kDa band; suggesting that.the 110 kDa band represented secreted pro-ADAMTS-8. There are 5 putative N-linked glycosylation sites within the mature ADAMTS-8 protein, which presumably accounts for the increased apparent molecular weight from the 75 kDa predicted for mature ADAMTS-8 to the observed 95 kDa. Western analysis of the purified protein fractions showed a preponderance of full-length protein, and only a minor proportion of immunoreactive bands of decreased molecular weight (lane 12 in Figure 2B). These minor products may be the result of degradation or autocatalysis of the mature ADAMTS-8 protein. An elution fraction containing both the pro-ADAMTS-8 and processed mature ADAMTS-8 was used for subsequent activity analyses. [0116] In this example, the full-length ADAMTS-8 cDNA was appended with a sequence encoding a carboxy-terminal Strep-tag1 and expressed in CHO cells. The protein was efficiently expressed and secreted to the conditioned medium. The full-length protein accumulated in the conditioned medium and was not appreciably proteolyzed into smaller WO 2005/116197 PCT/US2005/012539 32 products. This observation was supported by retention of the carboxy-tcrminaJ tag as determined by Western blotting with anti-Strep-tag antibodies and verified by the ability of the most of the protein to bind to Strep-Tactin resin. In contrast, the recombinant ADAMTS-4 as used for comparison was spontaneously proteolyzed at sites within the C-terminal domains, which generated a truncated molecule lacking the spacer domain. Truncation of ADAMTS-4 appears to be an autoproteolytic event, because a modified form of ADAMTS4 in which the catalytic activity has been destroyed by an E362Q active-site mutation did not demonstrate this spontaneous C-tenninal truncation (Flannery, et al.y J. Bio. CHEM., 277:42775-42780 (2002)). In addition, recombinant ADAMTS-5 (Aggrecanase-2) can self-truncate its C-terminus. Recombinant ADAMTS-12 also displays this characteristic of secondary C-terminal proteolysis (Ca], et al., J. BiOL. CHEM., 276:17932-17940 (2001)), though from the published report it is unclear if it is an autoproteolytic event or if it is mediated by other protease(s). Furthermore, expression of ADAMTS-1 in 293T cells reportedly resulted in three forms of the protein - namely, a pi 10 form representing pro-ADAMTS-1, a p87 fonrn which is presumed to be full-length mature ADAMTS-1, aod a p65 form which constitutes mature ADAMTS-1 C-terminally truncated within the spacer domain (Rodrigues-Manzaneque, et al.t J. BlOL.CHEM., 275:33471-33479 (2000)). Consistent with the observations with ADAMTS-4, an ADAMTS-1 active-site mutant did not C-tcrminally truncate, suggesting that an autoproteolytic mechanism is responsible for removal of the C-terminal domains. [01171 Based on these data, it was surprising that most recorabinant ADAMTS-8 isolated in this example retained its C-terminal domains and did not appear to autoproteolyze or become cleaved by another protease. The proteolytic activity of this recombinant ADAMTS-8 protein was verified by using the a-2 macroglobulin binding assay. Accordingly, the carboxy-terminal throrabospondin and spacer domains in ADAMTS-8 are uncharacteristically refractory to secondary processing by either its own catalytic activity or other processing enzymes, therefore providing a unique opportunity to assess the catalytic efficiency of a stable full-length ADAMTS protein. Example 5. Isolation of RNA from Articular Cartilage [0118] Non-osteoarthritic human articular cartilage was obtained from Clinomics (Pittsfield, MA), and osteoarthritic human articular cartilage was obtained from New England Baptist Hospital (Boston, MA). Samples were flash frozen in liquid nitrogen at the time of WO 2005/116197 PCT/US2005/012539 33 collection and stored at -80°C. For RNA isolation, 1 gram of frozen articular cartilage was milled twice (1 minute each, with a 2 minute cooling step between each milling) in a Spex Certiprep freezer mill (model 6750) at 15 Hz under liquid nitrogen. RNA was then isolated according to the method of McKenna et a!., ANAL. BiOCHEM., 286:80-85 (2000), with the following modifications. The miJIed cartilage was suspended in 4 rriL of ice-cold 4M guanidinium isothiocyanate (GITC, Gibco-BRL) containing 2.5 uJ of 2-mercaptoethanoI (2-ME). The suspension was immediately homogenized on ice for 1 minute using a Polytron homogenizer (Kinematica AG) at highest speed. The homogenized cartilage lysate was centriruged at 1500xg for 10 minutes at 4°C, the supernatant was saved, and the resulting pellet was homogenized again as before in another 4 ml of GITC/2-ME and centriruged again at 1500 x g for 10 minutes at 4°C. The supernatant fractions from each homogenate were combined and 0.65 ml of 25% Triton X-100 (100% stock from Sigma, diluted to 25% in RNase-free dt^O) was added to the pooled supernatant fractions. After incubation on ice for 15 minutes, 8 ml of RNase-free 3M NaOAc buffer pH 5.5 (Ambion) was added and the solution was incubated for another 15 minutes on ice. The homogenate was then extracted with 15 ml of acid phenol rchloroform 5:1, pH 4.5 (Ambion) by vigorous mixing for 1 minute, incubation on ice for 15 minutes, and ccntrirugation at 15,000 x g for 20 minutes at 4°C. The aqueous phase was then recovered and re-extracted with acid phenol:chJoroform using the same procedure as described above. The aqueous phase from the second acid phenol rcholoroform extraction was then extracted a third time with 15 ml of phenol:cbloroform:IAA 25:24:1 pH 6.7/8.0' (Arabion), mixed vigorously for 1 minute, incubated on ice for 15 minutes, and centrifuged at 15,000 x g for 20 minutes at 4°C. The aqueous phase was recovered, and 0.8 volumes of 100% 2-propanol were added. The solution was mixed, incubated on ice for 5 minutes, and centrifuged at 15,000 x g for 30 minutes at 4°C. The resulting supernatant was carefully decanted, a d the pellet was resuspended in 0.9 mJ of buffer RLT + 2-ME (Qiagen RNeasy kit). The pr :ocol described in McKenna et al, supra, was then followed to completion from this step on1 ard. Example 6. Tissue Distribution of APAMTS-8 [0119J A human multiple tissue expression array (MTE from Clontech) mRNA dot- blot was probed with a 393 bp ADAMTS-8 fragment which was a Bgin/HindTIT digested fragment corresponding to base pair 2070 through base pair 2463 of the ADAMTS-8 WO 2005/116197 PCTAJS2005/012539 34 sequence (Genbank accession number AF060153). The fragment contains a portion of the disintegrin domain and a portion of the central TSP type 1 motif. The fragment sequence was used to query GenBank using the Basic Local Alignment Search Tool, Version 2, from NCBI (NCBI- BlastN). The BlastN search found no significant homology between the ADAMTS-8 probe sequence and other human transcripts in the database, suggesting that the probe fragment would not cross-react with other human transcripts under the MTE hybridization conditions. [0120] The ADAMTS-8 probe fragment was purified and radiolabelled using the Ready-To-Go DNA Labelling Beads (-dCTP) from Amersham Pharmacia Biotech according to the manufacturer's instructions. The radiolabelled fragment was purified away from primers and unincorporated radionucleotidcs using a Nick column (Amersham Pharmacia Biotech) following the manufacturer's instructions and then used to probe the MTE. Hybridization and subsequent washing conditions for the MTE followed the manufacturer's suggested conditions for a radiolabelled cDNA probe (Clontech MTE Array User Manual). [0121] Figure 3A shows the result of the MTE hybridization analysis using mRNA from 76 different human tissues. A key denoting the placement of mRNA from the different tissues is shown in Figure 3B. Blank boxes indicate that no mRNA was spotted at those coordinates. The MTE hybridization analysis indicated that ADAMTS-8 has a more narrow tissue distribution and overall lower transcript abundance than the transcripts of the aggTecan-degrading ADAMTS-1 and ADAMTSM, which have a broad tissue distribution. One of die highest levels of ADAMTS-8 expression was seen in adult lung (Figure 3, row A, column 8), with lower levels found in fetal lung (Figure 3, row G, column 11). Expression in adult heart was detectable but low (Figure 3, column 4), with the exception of aorta that showed a high level of expression (Figure 3, row B, column 4): Fetal heart (Figure 3, row B, column'11) showed moderate levels of transcript abundance, and moderate to low level expression was seen in the various subsections of brain, appendix and bladder (e.g., G5, Al-Gl, C3-H3, and B3). Various cancer cell lines (Figure 3, column 10) showed low or no detectable levels of expression. Example 7. Real Time PCR [0122J Tissue expression in human articular cartilage was demonstrated by performing quantitative real-time PCR using TaqMan (Applied Biosystems). The Primer Express program from Applied Biosystems was used to design the following ADAMTS-8 WO 2005/116197 PCT/US2005/012539 35 primers and probe: ;5P primer GGACCGCTGCAAGTTGTTCT (SEQ ID NO: 14), 3P primer GGACACAGATGGCCAGTGTT (SEQ ID NO: 15), and probe CCATCAATCACCTTG GCCTCGAACA (SEQ ID NO: 16). The probe for ADAMTS-8 overlapped an exon/intron boundary, making it unable to hybridize to genomic DNA. Primers and a probe were designed to GAPDH and were as follows: 5P primer CCACATCGCTCAGACACCAT (SEQ ID. NO: 17), 3P primer GCGCCCAATACGACCAAA (SEQ ID NO: 18), and probe GGGAAGGTGAAGGTCGGAGTCAACG (SEQ ID NO: 19). The TaqMan probes (synthesized by the Wyeth Research Core Technologies Group): contained the 5P-reporter dye 6-FAM and the 3P-quencher TAMRA. [0123] Articular cartilage RNA was isolated from the knee joints of patients that were unaffected by osieoarthritis (disease-free), and from mildly affected and severely affected lesional regions of the knee joints from patients with osteoarthritis. Purified articular cartilage RNA was converted to cDNA prior to real-tune PCR by the following protocol, and TaqMan analysis was performed on first-strand cDNA of disease-free and osteoarthritic articular cartilage after reverse transcription of the mRNA. Total RNA (5 ug) was incubated for 10 minutes at 70<>C with 200 pmol of a primer containing a phage T7 promoter site and a 24 base poly T tail (GGCCAGTGAATTGTAATACGAC TCACTATAGGGAGGCGGrrni'l'lliriiTTllJ ill llllT (SEQ ID NO:20)). The RNA was then reverse transcribed using 10 Units/uJ Superscript II (Invitrogen) in a 20 u.1 reaction mixture for 1 hour at 50°C. The reaction mixture contained 0.25 u.g/u.1 totaj RNA, 10 pmol/ul T7T24 primer, IX 1st Strand Buffer (Invitrogen), 10 mM DTT (Invitrogen), 0.5 mM dNTPs (Invitrogen), and 1 Unit/u.1 SUPERase-ln (Ambion). Following first strand synthesis, second strand synthesis was performed. The reaction mix was brought to a final volume of 150 p.1. The reaction contained the first strand mix, and.the following reagents (final concentrations) - namely, IX 2nd Strand Buffer (Invitrogen), 0.2 mM dNTPs (Invitrogen), 0.067 units/ul E.coli DNA Ligase (New England Biolabs), 0.27 units/ui DNA Polymerase I (Invitrogen), and 0.013 units/uJ RNase >H (Invitrogen). The second strand synthesis reaction was incubated for 2 hours at I6°C. During the last 5 minutes of incubation, T4 DNA Polymerase (Invitrogen) was added to a final concentration of 0.067 units/ul. Following incubation, the reaction was brought to 16.67 mM EDTA and the resulting cDNA was purified using BioMag Carboxyl Terminated beads from PerSeptive Biosystems. The second strand reaction mix was brought to 10% PEG-8000/1.25M NaCl, and added to 10 u,I of BioMag beads (pre-washed with 0^5M EDTA). The cDNA and washed WO 2005/116197 PCT/US2005/012539 36 BioMag beads were mixed and incubated for 10 minutes at room temperature. The beads were washed 2 times with 300 JA] 70% ethanol with the aid of a Magna-Sep magnet from GibcoBRL. The beads were air dried for 2 minutes at room temperature after the final wash. The purified cDNA was eluted from the beads using lOmM Tris-Acetate (pH 7.8). The eluted cDNA was quantitated by measuring theabsorbance of a diluted aliquot of the eluate at 280 run using a spectrophotometer. Each TaqMan PCR reaction utilized 100 ng of articular cartilage cDNA for the ADAMTS-8 probe/primer set and was performed in duplicate. Expression levels between tissues were normalized using the GAPDH probe/primer set (Applied Biosysterns). The reactions components were derived from the TaqMan Universal PCRiMaster Mix from.Applied Biosystcms, following manufacturer's instructions, with a final1 concentration of 900 nmol/ul of primer and 250 nmol/ul probe. Reactions were incubated for 2 minutes at 50°C, followed by 10 minutes at 95°C, and then 40 cycles of 95°C for 15 seconds and 60°C for I minute. After the final cycle, the reactions were incubated for 2 minutes at 25°C. [0124] Figure 4 depicts a histogram of ADAMTS-8 mRNA expression levels in human clinical samples of disease-free and osteoarthritic (OA) cartilage determined by realtime PCR. Samples W-04 through W-13 represent non-OA affected ("Disease-Free") knee articular cartilage. Samples 77M - 96M represent visually unaffected regions of late-stage OA articular cartilage ("Mild OA"). Samples 88S - 98S represent severely affected regions of late-stage OA articular cartilage ("Severe OX"). ADAMTS-8 mRNA abundance in each sample was reported as a normalized value, by dividing the averaged data determined for ADAMTS-8 by the averaged data determined for GAPDH in the same sample. The results of the TaqMan analysis showed that there was no significant difference in average transcript level in unaffected cartilage compared to osteoarthritic cartilage, at least in the late-stage OA cartilage that was used in this study. However, the expression level of ADAMTS-8 was significantly increased in the OA cartilage sample 96M. This observation supports for a personalized approach to treat osteoarthritis, in selected patients who have elevated ADAMTS-8 expression in their cartilage tissues. Example 8. Production of Monoclonal Antibody AGG-C1 (MAb AGG-Cn [0125] The synthetic peptide CGGPLPRNITEGE (peptide aggcl, SEQ ED NO:21) was coupled to the carrier protein KLH, and the conjugate was used as the immunogen for WO 2005/116197 PCT/US2005/012539 37 the production of monoclonal antibodies by standard hybridoma technology. Briefly, BALB/c mice were immunized subcutaneously with 20 ug of inununogen in complete Freund's adjuvant. The injection was repeated twice (biweekly) using peptide in incomplete Freund's adjuvant. Test bleeds were done on the immunized mice, and serum was evaluated by ELISA for reactivity against both the immunizing peptide and ADAMTS-4-digested bovine articular cartilage aggrecan (Flanncry, et ait supra). Three days prior to hybridoma fusion, a final immunization without adjuvant was given to the mouse exhibiting highest antibody titer. Spleen cells from this mouse were isolated and fused with FO myeloma cells (American Type Culture Collection, Manassas, VA) and cultured in 'HAT selection medium ( Sigma-Aldrich, St. Louis, MO). Hybridoma culture supernatants were screened against KXH-CGGPLPRN1TEGE antigens by ELISA, and against ADAMTS-4-digested aggrecan by Western blotting. Positive hybridoma clones were selected for subcloning by limiting dilution. A single hybridoma cell line, designated AGG-C1, was expanded in culture. Antibody isotype was determined to be IgGl (K light chain) using ithe Mouse Monoclonal Antibody Isotyping kit (Roche, Indianapolis, IN) and IgG from 1 liter of culture media was purified by Protein A affinity chromatography. Example 9. Competitive inhibition ELISA Assays 10126} Competitive inhibition ELISA experiments were performed to demonstrate that MAb AGG-C1 specifically recognized the appropriate aggrecan neoepitope. Streptavidin-coated microtiter plates (Pierce, Rockford, IL) were coated with N-terminally biotinylated peptide aggcl (b-aggcl) by incubating each well with 100 ul of b-aggcl (100 ng/ml) for 1 h at room temperature. After washing 4 times with phosphate-buffered saline containing 0.01% Tween-20 (PBS-Tween), wells were blocked for 1 h at room temperature with 100 u,l of PBS-Tween containing 2% BSA, followed by 4 washes with PBS-Tween. [0127] In order to validate the neoepitope nature of MAb AGG-C1, competition mixtures (100 ul) comprised of MAb AGG-C1 (0.04 µg/ml) and 1.0-1000 nmol/ml of the synthetic peptides GGLPLPRN1TEGE (SEQ ID NO:22), GGLPLPRN1TEGE ARGSVILTVK-CONHj (SEQ ID NO:23), .undigested aggrecan, or ADAMTS-4 digested aggrecan were preincubated for 1 h at room temperature. Mixtures were then transferred to b-aggcl coated wells. After a further incubation for 1 h at room temperature, the plates were washed 4 times with PBS-Tween then incubated for 1 h at room temperature with 100 ul of peroxidase-conjugated secondary goat anti-mouse IgG (1:10,000). Following 4 final washes WO 2005/116197 PCT/US2OO5/012539 38 with PBS-Tween, the wells were incubated with TMB 1 component microwell peroxidase substrate (BioFX Laboratories, Owings Mills, MD). Color development was terminated by the addition of 0.18 M H2SO4, and the absorbance was monitored spectrophotometrically at 450 nm. [0128] For the generation of a standard curve, bovine aggrecan (25 µg in 50 µl) was digested with ADAMTS-4 (0.001 ng - 5 ng) for 16 h at 37°C. MAb AGG-C1 was then added to each digest (final antibody concentration of 0.04 µg/ml) and these mixtures were preincubated for 1 h at room temperature, followed by transfer to b-aggcl coated plates and completion of the ELISA. [0129] Figure 5 shows the results of competitive inhibition ELISAs using MAb AGG-C1. Dose-dependent competition was observed for the synthetic peptide GGLPLPRNITEGE (SEQ ID NO:22, the C-terminus of which corresponds to E373 of aggrecan core protein) and with ADAMTS4 digested aggrecan (closed squares and closed circles, respectively). The synthetic peptide GGPLPRN1TEGEARGSVILTVK. (SEQ ID NO:23) and undigested aggrecan did not compete in the assay (open squares and open circles, respectively). [0130] Figure:7 shows another competitive inhibition ELISA for aggrecanase activity. The standard curve was generated by incubating bovine aggrecan with increasing amounts of recombinant ADAMTS-4 for 16 h at 37°C followed by addition of MAb AGG-C1 to each digest. Similar assays were performed to estimate the relative aggrecanase activity of ADAMTS-8. Where 0.0135 pM of ADAMTS-4 were required to generate 45% inhibition in the competitive inhibition ELISA, 46.6 ± 4.8 pM of ADAMTS-8 were required to attain a similar level of activity. Example 10. Western Blotting of Aggrecan Digested with ADAMTS-8 and ADAMTS-4 [0131] The ability of ADAMTS-8 to cleave aggrecan at the aggrecanase cleavage site (Glu373-Ala374) that defines ostcoarthrilis-associated aggrecanase activity was demonstrated using two different monoclonal antibodies - namely, MAb BC-3 and MAb AGG-C1. MAb BC-3 specifically detects the neoepitope N-terminal sequence 374ARGXX... (SEQ ID NO:24). MAb AGG-Cl specifically detects the neoepitope C-terminal sequence ...NITEGE373 (SEQ ID NO:25). Both neoepitopes are generated by aggrecanase cleavage of the Glu373-Ala374 peptide bond within the aggrecan interglobular domain. WO 2005/116197 PCT/US2005/012539 39 [0 132] Figures 6A-6C demonstrate the results of the Western blot analyses of ADAMTS-4 and ADAMTS-8 digested aggrecan using MAb BC-3 and MAb AGG-C1. Figure 6A shows the Western blot using MAb BC-3. In lane 1, no enzyme was added. Lane 2 shows ADAMTS-4 digested aggrecan at an enzymc:substrate molar ratio of 1:20. Lanes 3-7 show ADAMTS-8 digested aggrecan at an enzyme:substrate molar ratio of 1:2, 1:0.5, 1:0.2, 1:0.1; and 1:0.07, respectively. MAb BC-3 immunoreactive bands increased in intensity with increasing amounts of ADAMTS-8 protein relative to aggrecan substrate (Figure 6A, lanes 3-7), indicative of aggrecan cleavage at the OA-relevant position. However, a greater amount of enzyme relative to substrate was required than when using ADAMTS4 (comparing lanes 3-7 to lane 2 in Figure 6A). [0133] Figure 6B is the Western blot using AGG-C1. The relative molar ratio of enzyme:substrate in each digest is indicated. MAb AGG-C1 immunoreactive bands were shown in Figure 6B using enzyme:substrate ratios ranging from 1:1 to 1:0.3. In the same assay, ADAMTS4 also produced MAb AGG-CI immunoreactive bands, but at much lower enzyme.substrate ratios (Figure 6C, lanes 2-6). The migration positions of globular protein standards are shown to the left of each blot. [0134] As a negative control, Western blots of aggrecan (25 µg) digested with up to 2.5 ug of rhMMP-13 produced no immunoreactive peptides, demonstrating that MAb AGG-CI does not recognize the neoepitope sequence ..D1PEN341 (SEQ ID NO:26) which is generated by MMP cleavage of aggrecan. Furthermore, aggrecan digested with MMP-13 at similar enzyme:substrate ratios used for ADAMTS-8 was immunoreactive with MAb BC-14, which recognizes the MMP-generated neoepitope sequence 342FFG.. (SEQ ID NO:27) but was not recognized by'MAb BC-3, which recognizes the aggrecanase-generated neoepitope sequence 373ARGXX.. (SEQ ID NO:24). 10135] Detailed procedures for Western blot analyses are: set forth below. Bovine articular cartilage aggrecan was incubated with purified ADAMTS-8 or ADAMTS-4 for 16 h at 37°C in 50 mM Tris, pH 7.3, containing 100 mM NaCl and 5 mM CaCh. Digestion products were degfycosylated by incubation for 2 h at 37°C in the presence of chondroitinasc ABC (Seikagaku America, Falmouth, MA; 1 mU/ug aggrecan), keratanase (Seikagaku; 1 mU/u,g aggrecan) and keratanase II (Seikagaku; 0.02 mU/ug aggrecan). Digestion products were separated on 4-12% Bis-Tris NuPAGE SDS PAGE gels (Invitrogen, Carlsbad, CA) and then electrophorctically transferred to nitrocellulose. Immunoreactive products were detected by Western Wotting with MAb AGG-CI (0.04 µg/ml) or MAb BC-3 (Caterson, et al, supra). Alkaline-phosphatase-conjugated secondary goat anti-mouse IgG (Promega Corp., Madison, WO 2005/116197 PCT/US2005/012539 40 W1; 1:7500) was subsequently incubated with the membranes, and NBT/BCIP substrate (Promcga) was used to visualize immunoreactivc bands. All antibody incubations were performed for 1 h at room temperature, and the immunoblots were incubated with the substrate for 5-15 min at room temperature to achieve optimum color development. [0136] Other than ADAMTS4 (Aggrecanase 1) and ADAMTS5 (Aggrecanase 2), two other ADAMTS family members (ADAMTS 1 and AOAMTS9) are reportedly capable of cleaving cartilage aggrecan somewhere within the protein, and both of them group in the same node on the phylogenetic-tree as Aggrecanase I, Aggrecanase 2, and ADAMTS-8. Figures 6A-6C show that the efficiency of ADAMTS-8's activity as an aggrecanase is comparable to that of these other ADAMTS family members. In addition, ADAMTS-8 aggrecanase activity appears to be specific for the Glu373-Ala374 site, because BC-3 Western blots (monitoring generation of the G-terminal aggrccan cleavage fragment) and AGG-C1 Western blots (monitoring generation of the N-terminal cleavage fragment) of aggrecan digested with recombinant human ADAMTS-8 show that the appropriate ncoepitope is created by ADAMTS-8 treatment, and both aggrecan fragments that arc generated appear to remain intact and are not further degraded, indicating a specific cleavage within the GI-G2 interglobular domain of aggrecan. [0137] Figures 6A-6C also demonstrate that cleavage of bovine articular cartilage aggrecan by ADAMTS-8 at an enzyme:substrate ratio of 1:0.5 using the BC:3 neoepitope MAb and perhaps even lower using the AGG-C1 neoepitope MAb can be readily detected. This efficiency of cleavage at the aggrecan Glu373-Ala374 peptide bond compares favorably with aggrecanase activities reported for ADAMTS-1 and ADAMTS-9. [0138] The comparison of ADAMTS-8 to ADAMTS-4 cleavage of aggrecan on the same Western blots revealed that ADAMTS-8 appeared to be less efficient than ADAMTS4 in cleaving cartilage aggrecan at the Glu373-Ala374 peptide bond under the test conditions. It has been suggested that carboxy-terminal proteolytic processing of ADAMTS4 may play a role in activating its proteolytic activity and mobilizing the enzyme by removing the putative C-terminal ECM-binding domains from the catalytic domain and reducing its affinity for GAG's present in the extracellular matrix. Thus, the possibility exists that ADAMTS-8 enzymatic activity may be inhibited by the persistent presence of the C-terrainal domains, and that C-tcrminally truncated ADAMTS-8 may show enhanced aggrecanase activity. To address this question, a modified ADAMTS-8 cDNA, in which the coding sequence for the C-terminal thrombospondin and spacer domains was deleted, was constructed and expressed. This recombinant C-terminally truncated ADAMTS-8 was efficiently expressed and secreted, WO 2005/116197 PCT/US2005/012539 and the purified protein was active as judged by a2-macroglobulin assay, but it seemed to be no more active than full-length recombinant ADAMTS-8 on aggrecan substrate as judged by AGG-C1 Western blotting. However, the ability of ADAMTS-8 to retain its C-terminal GAG-binding domains may render ADAMTS-8 more efficient at cleaving cartilage aggrecan in vivo by keeping the enzyme localized to the cartilage matrix and'thereby increasing the effective concentration of the enzyme. The presence of ADAMTS-8 mRNA in both normal and osteoarthritic human articular cartilage (Figure 4) lends further support to the possibility that ADAMTS-8 functions as an aggrecanase in vivo. [0139J Other related hyaluronan-biriding proteoglycans such as neurocan, brcvican, or versican may be cleaved more efficiently by ADAMTS-8. ADAMTS-8 mRNA is readily detectable in various subsections of brain, coincident with the expression patterns for neurocan and brevican. Murine ADAMTS-8 was first described as Meth2, one of two ADAMTS family members (ADAMTS-1 was the other) that was shown to be inhibitory in angiogenesis assays (Vazquez, et al.f supra). One of the few and most abundant sites of ADAMTS-8 mRNA expression is aorta, a tissue rich in versican. Versican is a important vascular extracellular matrix protein with diverse roles in cellular adhesion, proliferation, and migration. Thus, it is tempting to speculate that ADAMTS-8 might function as a versicanase in the endothclium, possibly cleaving versican after the G1 domain and releasing it from the matrix. Such ADAMTS-8-mediated loss of versican from proliferating endothelial cells may explain the observed anti-angiogenic activity of ADAMTS-8. Supporting this possibility is the observation that fragments of aortic versican that are cleaved at the Glu441-Ala442 bond are found in vivo, mirroring the cleavage specificity for ADAMTS-8 that we show in this study. Versicanase activity has already been shown for ADAMTS-1 and ADAMTS-4, increasing the likelihood that ADAMTS-8 may be capable of cleaving versican with some level of efficiency and specificity. Example 11. Expression Vectors [0140] The mammalian expression vector pMT2 CXM, which is a derivative of p91023(b), can be used in the present invention. The pMT2 CXM vector differs from p91023(b) in that the former contains the ampicillin resistance gene in place of the terracycline resistance gene and further contains an Xho I site for insertion of cDNA clones. The functional elements of pMT2 CXM include the adenovirus VA genes, the SV40 origin of replication (including the 72 bp enhancer), the adenovirus major late promoter (including a 5' WO 2005/116197 PCT/US2005/012539 42 splice site and the majority of the adenovirus tripartite leader sequence present on adenovirus late mRNAs), a 3' splice acceptor sit6, a DHFR insert, the SV40 early polyadenylation site (SV40), and pBR322 sequences needed for propagation in E. coil. [0141] Plasmid pMT2 CXM is obtained by EcoR I digestion of pMT2-VWF, which has been deposited with the American Type Culture Collection (ATCC), Rockville, MD (USA) under accession number ATCC 67122. EcoR I digestion excises the cDNA insert present in pMT2-VWF, yielding pMT2 in linear form which can be ligated and used to transform E. coli HB 101 or DH-5 to ampicillin resistance. Plasmid pMT2 DNA can be prepared by conventional methods. pMT2 CXM is then constructed using loopout/in mutagenesis. This removes bases 1075 to 1145 relative to the Hind III site near the SV40 origin of replication and enhancer sequences of pMT2. In addition, it inserts a sequence containing the recognition site,for the restriction. endonuclease Xho I. A derivative of pMT2CXM, termed pMT23, contains recognition sites for the restriction endonuclcases Pst I, EcoR I, Sal I and Xho I. Plasmid pMT2 CXM and pMT23 DNA may be prepared' by conventional methods. [0142J pEMC2Bl derived fromlpMT21 may also be suitable in practice of the present invention. pMT21 is derived from pMT2 which is derived from pMT2-VWF. As described above, EcoR I digestion excises the cDNA insert present in pMT-VWF, yielding pMT2 in linear form which can be ligated and used to transform E. Coli HR 101 or DH-5 to ampicillin resistance. Plasmid pMT2 DNA can be prepared by conventional methods. [0143] pMT21 is derived from pMT2 through the following two modifications. First, 76 bp of the 5' untranslated region of the DHFR cDNA including a stretch of 19 G residues from G/C tailing for cDNA cloning is deleted. In this process, Pst I, EcoR I, and Xhol sites are inserted immediately upstream of DHFR. [0144] Second, a unique Cla I site is introduced by digestion with EcoR V and Xba I, treatment with Klenow fragment of DNA polymerase I, and ligation to a Cla I linker (CATCGATG). This deletes a 250 bp segment from the adenovirus associated RNA (VAI) region but does not interfere with VAI RNA gene expression or function. pMT21 is digested with EcoR I and Xho I, and used to derive the vector pEMC2B 1. 10145] A portion of the EMCV leader is obtained from pMT2-ECATl by digestion with EcoR I and Pst I, resulting in a 2752 bp fragment. This fragment is digested with Taq I yielding an EcoR I-Taq I fragment of 508 bp which is purified by electrophoresis on low melting agarose gel. A 68 bp adapter and its complementary strand are synthesized with a 5* Taq I protruding end and a 3* Xho I protruding end. WO 2005/116197 PCT/US2005/012539 43 [0146) The adapter sequence matches the EMC virus leader sequence from nucleotidc 763 to 827. It also changes the ATG at position 10 within the EMC virus leader to an ATT and is followed by an Xho I site. A three way ligation of the pMT2l EcoR I-Xho I fragment, the EMC virus EcoR I-Taq I fragment, and the 68 bp oligonucleotide adapter Taq I-Xho I adapter resulting in the vector pEMC2Bl. [0147] This vector contains the SV40 origin of replication and enhancer, the adenovirus major late promoter, a cDNA copy of the majority of the adenovirus tripartite leader sequence, a small hybrid intervening sequence, an SV40 polyadenylation signal and the adenovims VA I gene, DHFR and ß-lactamase markers and an EMC sequence, in appropriate relationships to direct the high' level expression of the desired cDNA in mammalian cells. [0148] The construction of vectors may involve modification of the aggrecanase- rclated DNA sequences. For instance, a cDNA encoding an aggrecanase can be modified by removing the non-coding nucleotides on the 5' and 3’ ends of the coding region. The deleted non-coding nucleotides may or may not be replaced by other sequences known to be beneficial for expression. These vectors are transformed into appropriate host cells for expression of the aggrecanase of the present invention. [0149] In one specific example, the mammalian regulatory sequences flanking the coding sequence of aggrecanase are eliminated or replaced with bacterial sequences to create bacterial vectors for intracellular or extracellular expression of the aggrecanase molecule. The coding sequences can be further manipulated (e.g. ligated to other known linkers or modified by deleting non-coding sequences therefrom or altering nucleotides therein by other known techniques). An aggrecanase encoding sequence can then be inserted into a known bacterial vector using,procedures as appreciated by those skilled in:the art. The bacterial vector, can be transformed into bacterial host cells to express the aggrecanases of the present invention. For a strategy for producing extracellular expression of aggrecanase proteins in bacterial cells, see, e.g. European Patent Application 177,343. (0150] Similar manipulations can be performed for construction of an insect vector for expression in insect cells (see, e.g., procedures described in published European Patent Application 155,476). A yeast vector can also be constructed employing yeast regulatory sequences for intracciluiar or extracellular expression of the proteins of the present invention in yeast cells (see, e.g., procedures described in published PCT application WO86/00639 and European Patent Application 123,289). WO 2005/116197 PCT/US2005/012539 44 [0151] A method for producing high levels of aggrecanasc proteins in mammalian, bacterial, yeast, or insect host cell systems can involve the construction of cells containing multiple copies of the hcterologous aggrecanase gene. The heterologous gene can be linked to an amplifiable marker, e.g., the dihydrofolate reductase (DHFR) gene for which cells containing increased gene copies can be selected for propagation in increasing concentrations of methotrexate (MTX). This approach can be employed with a number of different cell types. [0152] For example, a plasmid containing a DNA sequence for an aggrecanase in operative association with other plasmid sequences enabling expression thereof and an DHFR expression plasmid (such as, pAdA26SV(A)3) can be co-introduced into DHFR-deficient CHO cells (DUKX-BII) by various methods including calcium phosphate-mediated transfection, electroporation, or protoplast fusion. DHFR expressing transformants are selected for growth in alpha media with dialyzed fetal calf serum, and subsequently selected for amplification by growth in increasing concentrations of MTX (e.g. sequential steps in 0.02, 0.2,1.0 and 5 µM MTX). Transformants are cloned, and biologically active aggrecanase expression is monitored by at least one of the assays described above. Aggrecanase protein expression should increase with increasing levels of MTX resistance. Aggrecanase polypeptides are characterized using standard techniques known in the art such as pulse labeling with 35S mcthionine or cysteine and polyacrylamide gel electrophoresis. Similar procedures can be followed to produce other aggrecanases. Example 12. Transfection of Expression Vectors [0153] As one example an aggrecanase nucleotide sequence of the present invention is cloned into the expression vector pED6. COS and CHO DUKX Bl I cells are transiently transfected with the aggrecanasc sequence by Iipofection (LF2000, Invitrogen) (+/- co-transfection of PACE on a separate PED6 plasmid). Duplicate transfections are performed for each molecule of interest: (a) one transfection set for harvesting conditioned media for activity assay and (b) the other transfection set for 35-S-methionine/cysteine metabolic labeling. [01541 On day one, media is changed to DME(COS) or alpha (CHO) media plus 1% heat-inactivated fetal calf serum +/- 100 µg/ml hepartn on wells of set (a) to be harvested for activity assay. After 48h, conditioned media is harvested for activity assay. WO 2005/116197 PCT/US2005/012539 45 [0155] On day 3, the duplicate wells of set (b) lare changed to MEM (methioninc- free/cysteine free) media plus 1% heat-inactivated fetal calf senim, 100µg/ml heparin and 100 µCi/ml 35S-methionine/cy8tcine (Rcdivue Pro mix, Amersham). Following 6h incubation at 37°C,' conditioned media is harvested and run on SDS-PAGE gels under reducing conditions. Proteins can be visualized by autoradiography. [0156] The foregoing description of the present invention provides illustration and description, but is not intended to be exhaustive or to limit the invention to the precise one disclosed: Modifications and variations are possible consistent with the above teachings or may be acquired from practice of the invention. Thus, it is noted that the scope of the invention is defined by the claims and their equivalents. WO 2005/116197 \ PCT/US2005/012539 What is claimed is 1. A method for cleaving a proteoglycan, comprising contacting said proteoglycan with an isolated ADAMTS-8 protein which cleaves said proteoglycan. 2. The method according to claim 1, wherein said proteoglycan is an aggrecan molecule. 3. A method according to claims 1 or 2, wherein said ADAMTS-8 protein is a mature ADAMTS-8 protein. 4. The method according to claim 3, wherein said mature ADAMTS-8 protein is encoded by GenBank Accession No. AF060153 but lacks signal peptide and prodomain. 5. The method according to claim 3, wherein said mature ADAMTS-8 protein comprises amino acids 214-890 of SEQ ID NO:28. ,6. A method for cleaving a proteoglycan, comprising contacting said proteoglycan with an isolated protease to cleave said proteoglycan, wherein said protease comprises an ADAMTS-8 metalloprotease catalytic domain. 7. The method of claim 6, wherein said proteoglycan is an aggrecan molecule. 8. A method-as in claims 6 or 7,: wherein said ADAMTS-8 metalloprotease catalytic domain consists of amino acids 214-439 of SEQ ID NO:28. 9. A method as in claims 6, 7, or 8, wherein said protease comprises amino acids 214-588 of SEQ IDNO:28. 10. A method for cleaving a proteoglycan, comprising expressing a protease from a recombinant expression vector, wherein said protease comprises an ADAMTS-8 metalloprotease catalytic domain, and said protease cleaves said proteoglycan. WO 2005/116197 PCT/US2005/0I2S39 47 11. The method of claim 10, wherein said proteoglycan is an aggrecan molecule, and said recombinant expression vector is expressed in a mammalian:cell which secretes said protease. 12. A method as in claims 10 or 11, wherein said recombinant expression vector comprises a sequence encoding amino acids 214-890 of SEQ ID NO:28. 13. A-method as in claims 10, 11, or 12, wherein said recombinant expression vector comprises a sequence encoding amino acids 214-588 of SEQ ID NO:28. 14. A method for identifying an agent capable of modulating an aggrecan cleavage activity of an ADAMTS-8 protein, said method comprising: contacting, said ADAMTS-8 protein with an aggrecan molecule in the presence or absence of said agent; and measuring the aggrecan cleavage activity of said ADAMTS-8 protein in the presence or absence of said agent, wherein a change in the aggrecan cleavage activity in the presence of said agent, as compared to in the absence of said agent, indicates that said agent is capable of modulating said aggrecan cleavage activity. 15. A pharmaceutical composition comprising said agent identified according to the method of claim 14. 16. A method for treating an aggrecan. cleavage abnormality in a mammal, comprising administering said agent identified according to the method of claim 14 to said mammal. 17. A method for identifying an agent capable of modulating an aggrecan cleavage activity of an ADAMTS-8 protein, said method comprising: contacting a protease with an aggrecan molecule in the presence or absence of said agent, said protease comprising an ADAMTS-8 metalloprotease catalytic domain and possessing the aggrecan cleavage activity; and measuring the aggrecan cleavage activity of said protease in the presence or absence of said agent, WO 2005/116197 PCT/US2005/012539 48 wherein a change in the aggrecan cleavage activity in the presence of said agent, as compared to in the absence of said agent, indicates that said agent is capable of modulating said aggrecan cleavage activity. 18. A method for modulating an aggrecan cleavage activity in an extracellular region of a mammalian cell, comprising inhibiting the expression of ADAMTS-8 in said mammalian cell. 19. The method of claim 18, wherein said inhibiting comprises introducing into said mammalian cell a polynucleotide which comprises or encodes an ADAMTS-8 RNAi or antisense sequence. 20. A method for treating an aggrecan cleavage abnormality in a mammal, comprising inhibiting the expression of ADAMTS-8 in selected cells of said mammal.

Documents

Application Documents

# Name Date
1 3255-KOLNP-2006_EXAMREPORT.pdf 2016-06-30
1 abstract-03255-kolnp-2006.jpg 2011-10-07
2 3255-kolnp-2006-withdrawal-letter.pdf 2011-10-07
2 03255-kolnp-2006-abstract.pdf 2011-10-07
3 3255-KOLNP-2006-OTHER PATENT DOCUMENT.pdf 2011-10-07
3 03255-kolnp-2006-claims.pdf 2011-10-07
4 3255-kolnp-2006-form 18.pdf 2011-10-07
4 03255-kolnp-2006-correspondence others-1.1.pdf 2011-10-07
5 3255-KOLNP-2006-CORRESPONDENCE-1.1.pdf 2011-10-07
5 03255-kolnp-2006-correspondence others.pdf 2011-10-07
6 03255-kolnp-2006-priority document.pdf 2011-10-07
6 03255-kolnp-2006-description(complete).pdf 2011-10-07
7 03255-kolnp-2006-priority document-1.1.pdf 2011-10-07
7 03255-kolnp-2006-drawings.pdf 2011-10-07
8 03255-kolnp-2006-pct other.pdf 2011-10-07
8 03255-kolnp-2006-form-1.pdf 2011-10-07
9 03255-kolnp-2006-international search authority report.pdf 2011-10-07
9 03255-kolnp-2006-form-3-1.1.pdf 2011-10-07
10 03255-kolnp-2006-form-3.pdf 2011-10-07
10 03255-kolnp-2006-international publication.pdf 2011-10-07
11 03255-kolnp-2006-form-5.pdf 2011-10-07
11 03255-kolnp-2006-general power of authority.pdf 2011-10-07
12 03255-kolnp-2006-form-5.pdf 2011-10-07
12 03255-kolnp-2006-general power of authority.pdf 2011-10-07
13 03255-kolnp-2006-form-3.pdf 2011-10-07
13 03255-kolnp-2006-international publication.pdf 2011-10-07
14 03255-kolnp-2006-form-3-1.1.pdf 2011-10-07
14 03255-kolnp-2006-international search authority report.pdf 2011-10-07
15 03255-kolnp-2006-form-1.pdf 2011-10-07
15 03255-kolnp-2006-pct other.pdf 2011-10-07
16 03255-kolnp-2006-drawings.pdf 2011-10-07
16 03255-kolnp-2006-priority document-1.1.pdf 2011-10-07
17 03255-kolnp-2006-description(complete).pdf 2011-10-07
17 03255-kolnp-2006-priority document.pdf 2011-10-07
18 03255-kolnp-2006-correspondence others.pdf 2011-10-07
18 3255-KOLNP-2006-CORRESPONDENCE-1.1.pdf 2011-10-07
19 3255-kolnp-2006-form 18.pdf 2011-10-07
19 03255-kolnp-2006-correspondence others-1.1.pdf 2011-10-07
20 3255-KOLNP-2006-OTHER PATENT DOCUMENT.pdf 2011-10-07
20 03255-kolnp-2006-claims.pdf 2011-10-07
21 3255-kolnp-2006-withdrawal-letter.pdf 2011-10-07
21 03255-kolnp-2006-abstract.pdf 2011-10-07
22 abstract-03255-kolnp-2006.jpg 2011-10-07
22 3255-KOLNP-2006_EXAMREPORT.pdf 2016-06-30